Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123966810

Identifier: 123966810

GI number: 123966810

Start: 1388451

End: 1389032

Strand: Reverse

Name: 123966810

Synonym: P9515_15771

Alternate gene names: NA

Gene position: 1389032-1388451 (Counterclockwise)

Preceding gene: 123966812

Following gene: 123966806

Centisome position: 81.51

GC content: 29.21

Gene sequence:

>582_bases
ATGGAAACTCTTAAAAAATTTCTTTATTTAGTTGTGGTTGGAGGAAGATCTCCAAAAGCAAATGTTGAACTACATGATGT
CAGATGGGTTATCGGTTCAAAAATTGAGGATACCTTTGATCAACTAAGAAATGCTTGGTTTGGATCTCACAATGGTTTAC
ATATTGATAGTTATAAAAAGATCGATTCAATTGATGGTTATAAAATAAATCTTAAAAATACAGATAAAACTAAATCAAAA
AAAACTTCTTTGAAGAAAGTAGAAATTCCTAATAAGAATTTATGGTTTGTAAATATTGGAGGATATGATCCTAGCTCTAT
GCAAGAAAAACATGAATTTGGACTTATCGTTGCCTCTAATTCATCAGAAGCAAAAAATAGAGCAAAATCAAAATGGCTGA
TTGACTGTAAACAAAAACATAAAGACGATATATCTGAGGTTGATAGTTTTACGGATGTAGATGATTGTGAGCTTATAAAA
AAAATAAGAAATTGGGAAATAGAATTAATACCGGATGATAGTTATGTGGAAGAAAAAAATGTTCCTGATTGGTTTGGTTA
TATGCGAATAGATAAAAAGTAA

Upstream 100 bases:

>100_bases
TTTCATAAAAAGGATTACTCTTTAAAAATATAAATTATCCTTTAATCATATCTTTCAGTTAACTATTTATTTTAATTATC
TATCTATTTAATGTAAACAA

Downstream 100 bases:

>100_bases
TTTTAAATATATAAAGACTCACCACGTAAAAGTTCAGAATTAAATTATTAATAATTAACTAGTAGTATTAAATCCTCCAC
TAACTAAGAAGATAATGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
METLKKFLYLVVVGGRSPKANVELHDVRWVIGSKIEDTFDQLRNAWFGSHNGLHIDSYKKIDSIDGYKINLKNTDKTKSK
KTSLKKVEIPNKNLWFVNIGGYDPSSMQEKHEFGLIVASNSSEAKNRAKSKWLIDCKQKHKDDISEVDSFTDVDDCELIK
KIRNWEIELIPDDSYVEEKNVPDWFGYMRIDKK

Sequences:

>Translated_193_residues
METLKKFLYLVVVGGRSPKANVELHDVRWVIGSKIEDTFDQLRNAWFGSHNGLHIDSYKKIDSIDGYKINLKNTDKTKSK
KTSLKKVEIPNKNLWFVNIGGYDPSSMQEKHEFGLIVASNSSEAKNRAKSKWLIDCKQKHKDDISEVDSFTDVDDCELIK
KIRNWEIELIPDDSYVEEKNVPDWFGYMRIDKK
>Mature_193_residues
METLKKFLYLVVVGGRSPKANVELHDVRWVIGSKIEDTFDQLRNAWFGSHNGLHIDSYKKIDSIDGYKINLKNTDKTKSK
KTSLKKVEIPNKNLWFVNIGGYDPSSMQEKHEFGLIVASNSSEAKNRAKSKWLIDCKQKHKDDISEVDSFTDVDDCELIK
KIRNWEIELIPDDSYVEEKNVPDWFGYMRIDKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22429; Mature: 22429

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLKKFLYLVVVGGRSPKANVELHDVRWVIGSKIEDTFDQLRNAWFGSHNGLHIDSYKK
CHHHHEEEEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCC
IDSIDGYKINLKNTDKTKSKKTSLKKVEIPNKNLWFVNIGGYDPSSMQEKHEFGLIVASN
CCCCCCEEEEECCCCCCHHHHCCCEEEECCCCCEEEEEECCCCCHHHHHHHHEEEEEECC
SSEAKNRAKSKWLIDCKQKHKDDISEVDSFTDVDDCELIKKIRNWEIELIPDDSYVEEKN
CHHHHHHHHCCEEEECHHHCCCCHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCC
VPDWFGYMRIDKK
CCCHHCEEEECCC
>Mature Secondary Structure
METLKKFLYLVVVGGRSPKANVELHDVRWVIGSKIEDTFDQLRNAWFGSHNGLHIDSYKK
CHHHHEEEEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCC
IDSIDGYKINLKNTDKTKSKKTSLKKVEIPNKNLWFVNIGGYDPSSMQEKHEFGLIVASN
CCCCCCEEEEECCCCCCHHHHCCCEEEECCCCCEEEEEECCCCCHHHHHHHHEEEEEECC
SSEAKNRAKSKWLIDCKQKHKDDISEVDSFTDVDDCELIKKIRNWEIELIPDDSYVEEKN
CHHHHHHHHCCEEEECHHHCCCCHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCC
VPDWFGYMRIDKK
CCCHHCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA