Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is yjgQ [C]

Identifier: 123966805

GI number: 123966805

Start: 1384344

End: 1385504

Strand: Reverse

Name: yjgQ [C]

Synonym: P9515_15721

Alternate gene names: 123966805

Gene position: 1385504-1384344 (Counterclockwise)

Preceding gene: 123966806

Following gene: 123966804

Centisome position: 81.3

GC content: 30.75

Gene sequence:

>1161_bases
ATGTCTGCAATTTTAAGAAAAATTCCTCTTATAGATAAGTGGATAATATCGAAATTAATACCAATATTATTTTTTGCAAT
TTCTGCTTTTACCATCGTATCTCTCTCCGTAGGGGTAATGTTTGATCTCATAAGAAAGATTGTTGAGTATGGATTACCTA
TTTTTATAGCTTTAAAAATCTTTTTTTTAAGCCTGCCAGGATTCTTGGTTATTGCATTTCCTATGTCCGTTCTACTCTCA
TGCTTACTAACTTATGGCAATCTTTCTTCAAATTCAGAAATATTAGCGCTAAAAAGTCTAGGAGTTAATAATTTTCGAGT
AGTTTTACCTTCTTTGCTTTTGGCAGTTTTTATGACATTTCTTACATTTACTTTTAGTGATAATTTGGTTCCAATTTCAA
ATCGTTTGGCCGCTGATTTATTGCAGAATAGTATGGGGAAATCAATGAGAACTGAAAGAGGAAGATATAATATTTCATTT
TCGAAATATGGTTCAATTGTAGATAGTAATACTAATAAACCTATTGATGGAGCTTCTCATTTAACTCATATTTTTTATGC
ACGGAGATTCCTAAAGAAAACCATGTATGATATTACAGTTATTGATTTTTCAAAAAAAGGAACAAAAATATTAATAACCG
CTCAAAATGGTGTATTTGATGAAGAATTAAGTAGTTGGCAATTTAATAATGGAAAGATAATGGCTACTGAGGATGAGGGA
TCTGTATCAACGATAATATTTGATACCTACATTTATCCATTAGATAATGGTCCATCTAAATTAGCTGAGATCCCTCTTGA
CGCAAATAATATGACAATATCTCAAGCTAGAAAAGCTCAGAAAATGTATGAGATGTCAGGAAATACAAAAGAATCTAGAA
AGATGAAAGTAAGAATTTATGAAAAAATGACATTACCTATGTCCTGCATAGTTTTTGCTTTGATAGGTAGCACGCTTGGG
ATAAAACAAAATATTAGATCTTCAAAGAGTCAAGGATTTGGTATTAGTATTATACTTATTTTTTTATATTATTTAACTTG
TTTCGTTTTTAGTTCGATGGGGGTTATTGGTATATTGACTCCCTTTTTTGCAGCTTGGATACCTGTCCTTATGTTTTTAG
GTTTTGGAACCTTCTTACTATGGAGATCTAACGGAGTTTAG

Upstream 100 bases:

>100_bases
ATCTCTTTAGTAGATCTAATAGTATATATATTTTTCCAATAAAAGTAGTTCCTTCTAGTCTAGAATTATTATCTTGAGAA
ATTTAAAACTGCACTATAAG

Downstream 100 bases:

>100_bases
TTAGGTATTGATCTTTTAAAATGATATATTTCTTTTCTAGTTTGTTTAAGTTATTTATCCATATATCCAACATTTTTTAA
TTGAAACTAAAGACTCTTTG

Product: putative permease

Products: NA

Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Family Protein; Unclassified ABC-Type Transport System Permease; Permease Family Protein; YjgP/YjgQ Permease Superfamily; YjgP/YjgQ Family Permease; YjgP/YjgQ Permease; YjgP/YjgQ Family Membrane Protein

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MSAILRKIPLIDKWIISKLIPILFFAISAFTIVSLSVGVMFDLIRKIVEYGLPIFIALKIFFLSLPGFLVIAFPMSVLLS
CLLTYGNLSSNSEILALKSLGVNNFRVVLPSLLLAVFMTFLTFTFSDNLVPISNRLAADLLQNSMGKSMRTERGRYNISF
SKYGSIVDSNTNKPIDGASHLTHIFYARRFLKKTMYDITVIDFSKKGTKILITAQNGVFDEELSSWQFNNGKIMATEDEG
SVSTIIFDTYIYPLDNGPSKLAEIPLDANNMTISQARKAQKMYEMSGNTKESRKMKVRIYEKMTLPMSCIVFALIGSTLG
IKQNIRSSKSQGFGISIILIFLYYLTCFVFSSMGVIGILTPFFAAWIPVLMFLGFGTFLLWRSNGV

Sequences:

>Translated_386_residues
MSAILRKIPLIDKWIISKLIPILFFAISAFTIVSLSVGVMFDLIRKIVEYGLPIFIALKIFFLSLPGFLVIAFPMSVLLS
CLLTYGNLSSNSEILALKSLGVNNFRVVLPSLLLAVFMTFLTFTFSDNLVPISNRLAADLLQNSMGKSMRTERGRYNISF
SKYGSIVDSNTNKPIDGASHLTHIFYARRFLKKTMYDITVIDFSKKGTKILITAQNGVFDEELSSWQFNNGKIMATEDEG
SVSTIIFDTYIYPLDNGPSKLAEIPLDANNMTISQARKAQKMYEMSGNTKESRKMKVRIYEKMTLPMSCIVFALIGSTLG
IKQNIRSSKSQGFGISIILIFLYYLTCFVFSSMGVIGILTPFFAAWIPVLMFLGFGTFLLWRSNGV
>Mature_385_residues
SAILRKIPLIDKWIISKLIPILFFAISAFTIVSLSVGVMFDLIRKIVEYGLPIFIALKIFFLSLPGFLVIAFPMSVLLSC
LLTYGNLSSNSEILALKSLGVNNFRVVLPSLLLAVFMTFLTFTFSDNLVPISNRLAADLLQNSMGKSMRTERGRYNISFS
KYGSIVDSNTNKPIDGASHLTHIFYARRFLKKTMYDITVIDFSKKGTKILITAQNGVFDEELSSWQFNNGKIMATEDEGS
VSTIIFDTYIYPLDNGPSKLAEIPLDANNMTISQARKAQKMYEMSGNTKESRKMKVRIYEKMTLPMSCIVFALIGSTLGI
KQNIRSSKSQGFGISIILIFLYYLTCFVFSSMGVIGILTPFFAAWIPVLMFLGFGTFLLWRSNGV

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43222; Mature: 43091

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAILRKIPLIDKWIISKLIPILFFAISAFTIVSLSVGVMFDLIRKIVEYGLPIFIALKI
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FFLSLPGFLVIAFPMSVLLSCLLTYGNLSSNSEILALKSLGVNNFRVVLPSLLLAVFMTF
HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
LTFTFSDNLVPISNRLAADLLQNSMGKSMRTERGRYNISFSKYGSIVDSNTNKPIDGASH
HHHHHCCCEECHHHHHHHHHHHHHHCCHHHHCCCCEEEEHHHHCCEEECCCCCCCCHHHH
LTHIFYARRFLKKTMYDITVIDFSKKGTKILITAQNGVFDEELSSWQFNNGKIMATEDEG
HHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEECCCCCHHHHHCCEECCCEEEEECCCC
SVSTIIFDTYIYPLDNGPSKLAEIPLDANNMTISQARKAQKMYEMSGNTKESRKMKVRIY
CEEEEEEEEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHEEEEEE
EKMTLPMSCIVFALIGSTLGIKQNIRSSKSQGFGISIILIFLYYLTCFVFSSMGVIGILT
HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
PFFAAWIPVLMFLGFGTFLLWRSNGV
HHHHHHHHHHHHHHHHHEEEEECCCC
>Mature Secondary Structure 
SAILRKIPLIDKWIISKLIPILFFAISAFTIVSLSVGVMFDLIRKIVEYGLPIFIALKI
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FFLSLPGFLVIAFPMSVLLSCLLTYGNLSSNSEILALKSLGVNNFRVVLPSLLLAVFMTF
HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
LTFTFSDNLVPISNRLAADLLQNSMGKSMRTERGRYNISFSKYGSIVDSNTNKPIDGASH
HHHHHCCCEECHHHHHHHHHHHHHHCCHHHHCCCCEEEEHHHHCCEEECCCCCCCCHHHH
LTHIFYARRFLKKTMYDITVIDFSKKGTKILITAQNGVFDEELSSWQFNNGKIMATEDEG
HHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEECCCCCHHHHHCCEECCCEEEEECCCC
SVSTIIFDTYIYPLDNGPSKLAEIPLDANNMTISQARKAQKMYEMSGNTKESRKMKVRIY
CEEEEEEEEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHEEEEEE
EKMTLPMSCIVFALIGSTLGIKQNIRSSKSQGFGISIILIFLYYLTCFVFSSMGVIGILT
HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
PFFAAWIPVLMFLGFGTFLLWRSNGV
HHHHHHHHHHHHHHHHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA