| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966795
Identifier: 123966795
GI number: 123966795
Start: 1378070
End: 1378699
Strand: Reverse
Name: 123966795
Synonym: P9515_15621
Alternate gene names: NA
Gene position: 1378699-1378070 (Counterclockwise)
Preceding gene: 123966797
Following gene: 123966790
Centisome position: 80.9
GC content: 30.48
Gene sequence:
>630_bases TTGATTAAAGATAATAGACTTTTTTTTCCTGCCACTAATCGTAATAGAAAGTGTATAGGAGATTTATTATCAACAATTCC GCTTAAAGGAGGATCAATCTTAGAAATTGGTAGTGGTAGTGGGGAACACGCTGTTGTATTTCAAAAACGCTTCCCGGAAA TACTATGGCAATCAAGTGATCCTCTTCTTATTCATAGAAATAGTATCGCTGCCTGGATTGATTATGAAGGACTAAATTTT AAAATGCCTCAACCTATAGACATAAATGTTGAGAACATTCCTTGGATAATTCCCTCGAAGGTAAAAGAATCCCTTCATAT TATTATATCTATAAATATGATTCATATAGCATGCTGGAATTGCACAAAATCATTATTTAGGGAGTCTAGTAAATTATTAA AAAATGGACAATTTTTAATATTGTACGGGCCTTTTAAAATTGGTAATAAGCACACAAGTCAAAGTAATAATTTATTTGAT AAATCATTAAAAATGCAAAATAAGTTATGGGGTATCCGAAATCTTGAAGAAGTAAGCAATGAAGCCATCAAAAATAGTTT CGTTCAAGAAAAGTTATGTCAAATGCCAGCAAATAACTTTTCTGTAATTTATAGGAAAGTTTCTAAATAA
Upstream 100 bases:
>100_bases TAAAGCCCCAAAATTGCGACGAGCTAAATAAATAAATATATATATAATTATATCGCTGAACAAATATTAATTATTACTTT TTTTGTATAAAGGGACTTTT
Downstream 100 bases:
>100_bases TAATTAATTTTAAATAAAACTTGCAATACATTTAAAGTCGAAATTCATTTTTATACTCCTTACTTTTTAATGTATCTTTA ATTTATATTATTAGAAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MIKDNRLFFPATNRNRKCIGDLLSTIPLKGGSILEIGSGSGEHAVVFQKRFPEILWQSSDPLLIHRNSIAAWIDYEGLNF KMPQPIDINVENIPWIIPSKVKESLHIIISINMIHIACWNCTKSLFRESSKLLKNGQFLILYGPFKIGNKHTSQSNNLFD KSLKMQNKLWGIRNLEEVSNEAIKNSFVQEKLCQMPANNFSVIYRKVSK
Sequences:
>Translated_209_residues MIKDNRLFFPATNRNRKCIGDLLSTIPLKGGSILEIGSGSGEHAVVFQKRFPEILWQSSDPLLIHRNSIAAWIDYEGLNF KMPQPIDINVENIPWIIPSKVKESLHIIISINMIHIACWNCTKSLFRESSKLLKNGQFLILYGPFKIGNKHTSQSNNLFD KSLKMQNKLWGIRNLEEVSNEAIKNSFVQEKLCQMPANNFSVIYRKVSK >Mature_209_residues MIKDNRLFFPATNRNRKCIGDLLSTIPLKGGSILEIGSGSGEHAVVFQKRFPEILWQSSDPLLIHRNSIAAWIDYEGLNF KMPQPIDINVENIPWIIPSKVKESLHIIISINMIHIACWNCTKSLFRESSKLLKNGQFLILYGPFKIGNKHTSQSNNLFD KSLKMQNKLWGIRNLEEVSNEAIKNSFVQEKLCQMPANNFSVIYRKVSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=181, Percent_Identity=38.121546961326, Blast_Score=120, Evalue=8e-28, Organism=Homo sapiens, GI93102391, Length=123, Percent_Identity=39.0243902439024, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71998087, Length=203, Percent_Identity=28.0788177339901, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI28574095, Length=194, Percent_Identity=34.020618556701, Blast_Score=108, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23928; Mature: 23928
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKDNRLFFPATNRNRKCIGDLLSTIPLKGGSILEIGSGSGEHAVVFQKRFPEILWQSSD CCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEHHHCHHHHHCCCC PLLIHRNSIAAWIDYEGLNFKMPQPIDINVENIPWIIPSKVKESLHIIISINMIHIACWN CEEEECCCEEEEEEECCCCEECCCCCEECCCCCCEECCHHHCCCEEEEEEEEEEEEEEHH CTKSLFRESSKLLKNGQFLILYGPFKIGNKHTSQSNNLFDKSLKMQNKLWGIRNLEEVSN HHHHHHHHHHHHHHCCCEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH EAIKNSFVQEKLCQMPANNFSVIYRKVSK HHHHHHHHHHHHHHCCCCCCEEEEEEECC >Mature Secondary Structure MIKDNRLFFPATNRNRKCIGDLLSTIPLKGGSILEIGSGSGEHAVVFQKRFPEILWQSSD CCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEHHHCHHHHHCCCC PLLIHRNSIAAWIDYEGLNFKMPQPIDINVENIPWIIPSKVKESLHIIISINMIHIACWN CEEEECCCEEEEEEECCCCEECCCCCEECCCCCCEECCHHHCCCEEEEEEEEEEEEEEHH CTKSLFRESSKLLKNGQFLILYGPFKIGNKHTSQSNNLFDKSLKMQNKLWGIRNLEEVSN HHHHHHHHHHHHHHCCCEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH EAIKNSFVQEKLCQMPANNFSVIYRKVSK HHHHHHHHHHHHHHCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA