Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966795

Identifier: 123966795

GI number: 123966795

Start: 1378070

End: 1378699

Strand: Reverse

Name: 123966795

Synonym: P9515_15621

Alternate gene names: NA

Gene position: 1378699-1378070 (Counterclockwise)

Preceding gene: 123966797

Following gene: 123966790

Centisome position: 80.9

GC content: 30.48

Gene sequence:

>630_bases
TTGATTAAAGATAATAGACTTTTTTTTCCTGCCACTAATCGTAATAGAAAGTGTATAGGAGATTTATTATCAACAATTCC
GCTTAAAGGAGGATCAATCTTAGAAATTGGTAGTGGTAGTGGGGAACACGCTGTTGTATTTCAAAAACGCTTCCCGGAAA
TACTATGGCAATCAAGTGATCCTCTTCTTATTCATAGAAATAGTATCGCTGCCTGGATTGATTATGAAGGACTAAATTTT
AAAATGCCTCAACCTATAGACATAAATGTTGAGAACATTCCTTGGATAATTCCCTCGAAGGTAAAAGAATCCCTTCATAT
TATTATATCTATAAATATGATTCATATAGCATGCTGGAATTGCACAAAATCATTATTTAGGGAGTCTAGTAAATTATTAA
AAAATGGACAATTTTTAATATTGTACGGGCCTTTTAAAATTGGTAATAAGCACACAAGTCAAAGTAATAATTTATTTGAT
AAATCATTAAAAATGCAAAATAAGTTATGGGGTATCCGAAATCTTGAAGAAGTAAGCAATGAAGCCATCAAAAATAGTTT
CGTTCAAGAAAAGTTATGTCAAATGCCAGCAAATAACTTTTCTGTAATTTATAGGAAAGTTTCTAAATAA

Upstream 100 bases:

>100_bases
TAAAGCCCCAAAATTGCGACGAGCTAAATAAATAAATATATATATAATTATATCGCTGAACAAATATTAATTATTACTTT
TTTTGTATAAAGGGACTTTT

Downstream 100 bases:

>100_bases
TAATTAATTTTAAATAAAACTTGCAATACATTTAAAGTCGAAATTCATTTTTATACTCCTTACTTTTTAATGTATCTTTA
ATTTATATTATTAGAAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MIKDNRLFFPATNRNRKCIGDLLSTIPLKGGSILEIGSGSGEHAVVFQKRFPEILWQSSDPLLIHRNSIAAWIDYEGLNF
KMPQPIDINVENIPWIIPSKVKESLHIIISINMIHIACWNCTKSLFRESSKLLKNGQFLILYGPFKIGNKHTSQSNNLFD
KSLKMQNKLWGIRNLEEVSNEAIKNSFVQEKLCQMPANNFSVIYRKVSK

Sequences:

>Translated_209_residues
MIKDNRLFFPATNRNRKCIGDLLSTIPLKGGSILEIGSGSGEHAVVFQKRFPEILWQSSDPLLIHRNSIAAWIDYEGLNF
KMPQPIDINVENIPWIIPSKVKESLHIIISINMIHIACWNCTKSLFRESSKLLKNGQFLILYGPFKIGNKHTSQSNNLFD
KSLKMQNKLWGIRNLEEVSNEAIKNSFVQEKLCQMPANNFSVIYRKVSK
>Mature_209_residues
MIKDNRLFFPATNRNRKCIGDLLSTIPLKGGSILEIGSGSGEHAVVFQKRFPEILWQSSDPLLIHRNSIAAWIDYEGLNF
KMPQPIDINVENIPWIIPSKVKESLHIIISINMIHIACWNCTKSLFRESSKLLKNGQFLILYGPFKIGNKHTSQSNNLFD
KSLKMQNKLWGIRNLEEVSNEAIKNSFVQEKLCQMPANNFSVIYRKVSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI93102387, Length=181, Percent_Identity=38.121546961326, Blast_Score=120, Evalue=8e-28,
Organism=Homo sapiens, GI93102391, Length=123, Percent_Identity=39.0243902439024, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71998087, Length=203, Percent_Identity=28.0788177339901, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28574095, Length=194, Percent_Identity=34.020618556701, Blast_Score=108, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23928; Mature: 23928

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKDNRLFFPATNRNRKCIGDLLSTIPLKGGSILEIGSGSGEHAVVFQKRFPEILWQSSD
CCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEHHHCHHHHHCCCC
PLLIHRNSIAAWIDYEGLNFKMPQPIDINVENIPWIIPSKVKESLHIIISINMIHIACWN
CEEEECCCEEEEEEECCCCEECCCCCEECCCCCCEECCHHHCCCEEEEEEEEEEEEEEHH
CTKSLFRESSKLLKNGQFLILYGPFKIGNKHTSQSNNLFDKSLKMQNKLWGIRNLEEVSN
HHHHHHHHHHHHHHCCCEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
EAIKNSFVQEKLCQMPANNFSVIYRKVSK
HHHHHHHHHHHHHHCCCCCCEEEEEEECC
>Mature Secondary Structure
MIKDNRLFFPATNRNRKCIGDLLSTIPLKGGSILEIGSGSGEHAVVFQKRFPEILWQSSD
CCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEHHHCHHHHHCCCC
PLLIHRNSIAAWIDYEGLNFKMPQPIDINVENIPWIIPSKVKESLHIIISINMIHIACWN
CEEEECCCEEEEEEECCCCEECCCCCEECCCCCCEECCHHHCCCEEEEEEEEEEEEEEHH
CTKSLFRESSKLLKNGQFLILYGPFKIGNKHTSQSNNLFDKSLKMQNKLWGIRNLEEVSN
HHHHHHHHHHHHHHCCCEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
EAIKNSFVQEKLCQMPANNFSVIYRKVSK
HHHHHHHHHHHHHHCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA