| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966788
Identifier: 123966788
GI number: 123966788
Start: 1373451
End: 1373609
Strand: Direct
Name: 123966788
Synonym: P9515_15551
Alternate gene names: NA
Gene position: 1373451-1373609 (Clockwise)
Preceding gene: 123966787
Following gene: 123966789
Centisome position: 80.59
GC content: 27.67
Gene sequence:
>159_bases ATGGAAGATTTGTTTTTTTCTTCGAATCAAATAACAAAAAAAGATACTATAGATTCATATTTTGAATGCATTAGTGAATG CAGCATTGTTGATGGCCATCAAGAATGTATAACTCGATGTGTAGAAATTCATCTTAAAGGAGGAAATAAAAATGAATAA
Upstream 100 bases:
>100_bases AGATAGTAACTAATACTTATTTATTCGTAATTTCTTAACAAAGCAACAATTAACTTTTAAAGCTATGCTATATCTCATTC CAAATTAAGGAACAAAAATT
Downstream 100 bases:
>100_bases AAAATATTCTCTTCAAAGAAAAACAACTTTAAAGTGGAACTCTAATGGCGATCTTTCTGAGATTGATATGCTGAGAATTT TGGATAAAATTTCGGCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 52
Protein sequence:
>52_residues MEDLFFSSNQITKKDTIDSYFECISECSIVDGHQECITRCVEIHLKGGNKNE
Sequences:
>Translated_52_residues MEDLFFSSNQITKKDTIDSYFECISECSIVDGHQECITRCVEIHLKGGNKNE >Mature_52_residues MEDLFFSSNQITKKDTIDSYFECISECSIVDGHQECITRCVEIHLKGGNKNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5957; Mature: 5957
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 7.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDLFFSSNQITKKDTIDSYFECISECSIVDGHQECITRCVEIHLKGGNKNE CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MEDLFFSSNQITKKDTIDSYFECISECSIVDGHQECITRCVEIHLKGGNKNE CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA