| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966752
Identifier: 123966752
GI number: 123966752
Start: 1352219
End: 1352770
Strand: Direct
Name: 123966752
Synonym: P9515_15191
Alternate gene names: NA
Gene position: 1352219-1352770 (Clockwise)
Preceding gene: 123966751
Following gene: 123966753
Centisome position: 79.35
GC content: 30.8
Gene sequence:
>552_bases ATGACAGAAAATAAAATTCCAATATGGAGACAAGAATTAAAATCTGCGAGAATTAAAGAGGGTAAATTACCCTCAAGCAG ATGGATTCAGTTGTGTACAGTTAATAATAATAACGAGCCTAGATTGCGGACAGTTGTCTTTAGAGGATGGAAAACAGAAA GTTCAATCCTTGTTTTTACTGATCAACTTAGTGAAAAATTTTCTCATTTACAATTTAATTCCAATGCGGAGGTTTTATGG CTTTTTTTTAGAAGCAAATCGCAATTTAGATTTAAAGGAAAGATGAAGGAAGTGAAGGAAAACATAAAATATTGGGATTC ATTATCAGATAGCGCAAAATCAACTTGGTTTTGGCCGCATCCAGGAAAAGAGATTGATCACAAAATTCAACAACCTCAAA TGATTTCTAATAATTTGAATAAACCAGAAAGATTCGTTGTACTTGAAATTGAAATATATTCTGTAGATCTTCTCAAATTA GTTAAGCCAATACACAAGAGATATGTCTGGAATAAAGAAGATAATTGGAAAAAAATAGAAATATATCCTTAA
Upstream 100 bases:
>100_bases GTCTTTCTACCAAGAATGCTAAAAAAGGACAAATCACTGACAAAATACGATTCATTTAAGGAGTATCAACAAATTAGTGG TTTAATCTTTCCTAAATTCA
Downstream 100 bases:
>100_bases AAATATTTCTAATTTGTTTACTTAGGTTGAAAAAGCTATATAGATCGGTCAGTTTGGTTAAAGAAACATTATCCTTATGA ATTTCTCAGAAATTCCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Pyridoxamine Phosphate Oxidase
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTENKIPIWRQELKSARIKEGKLPSSRWIQLCTVNNNNEPRLRTVVFRGWKTESSILVFTDQLSEKFSHLQFNSNAEVLW LFFRSKSQFRFKGKMKEVKENIKYWDSLSDSAKSTWFWPHPGKEIDHKIQQPQMISNNLNKPERFVVLEIEIYSVDLLKL VKPIHKRYVWNKEDNWKKIEIYP
Sequences:
>Translated_183_residues MTENKIPIWRQELKSARIKEGKLPSSRWIQLCTVNNNNEPRLRTVVFRGWKTESSILVFTDQLSEKFSHLQFNSNAEVLW LFFRSKSQFRFKGKMKEVKENIKYWDSLSDSAKSTWFWPHPGKEIDHKIQQPQMISNNLNKPERFVVLEIEIYSVDLLKL VKPIHKRYVWNKEDNWKKIEIYP >Mature_182_residues TENKIPIWRQELKSARIKEGKLPSSRWIQLCTVNNNNEPRLRTVVFRGWKTESSILVFTDQLSEKFSHLQFNSNAEVLWL FFRSKSQFRFKGKMKEVKENIKYWDSLSDSAKSTWFWPHPGKEIDHKIQQPQMISNNLNKPERFVVLEIEIYSVDLLKLV KPIHKRYVWNKEDNWKKIEIYP
Specific function: Unknown
COG id: COG5135
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22069; Mature: 21937
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENKIPIWRQELKSARIKEGKLPSSRWIQLCTVNNNNEPRLRTVVFRGWKTESSILVFT CCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCEEEEEE DQLSEKFSHLQFNSNAEVLWLFFRSKSQFRFKGKMKEVKENIKYWDSLSDSAKSTWFWPH HHHHHHHHHEEECCCCCEEEEEEECCCCEEECCHHHHHHHHHHHHHCCCCCCCCCEECCC PGKEIDHKIQQPQMISNNLNKPERFVVLEIEIYSVDLLKLVKPIHKRYVWNKEDNWKKIE CCHHHHHHCCCCHHHHCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCEEEEE IYP ECC >Mature Secondary Structure TENKIPIWRQELKSARIKEGKLPSSRWIQLCTVNNNNEPRLRTVVFRGWKTESSILVFT CCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCEEEEEE DQLSEKFSHLQFNSNAEVLWLFFRSKSQFRFKGKMKEVKENIKYWDSLSDSAKSTWFWPH HHHHHHHHHEEECCCCCEEEEEEECCCCEEECCHHHHHHHHHHHHHCCCCCCCCCEECCC PGKEIDHKIQQPQMISNNLNKPERFVVLEIEIYSVDLLKLVKPIHKRYVWNKEDNWKKIE CCHHHHHHCCCCHHHHCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCEEEEE IYP ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA