Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123966745

Identifier: 123966745

GI number: 123966745

Start: 1346558

End: 1346926

Strand: Reverse

Name: 123966745

Synonym: P9515_15121

Alternate gene names: NA

Gene position: 1346926-1346558 (Counterclockwise)

Preceding gene: 123966746

Following gene: 123966742

Centisome position: 79.04

GC content: 35.23

Gene sequence:

>369_bases
ATGAATAAATTTGAATTTTTTAAAACTGATGCAATTCAATCAAGTTATGGTGGACAATTTAGCTATAAAGTAATTGGACC
GTGTTGTAGGCTATATGATAGAGAAGAGCTGCCTTGGCCATGCTCTAGACTTGCTTGGCGTAGTAAAGAACCTAGTTGGA
GAAGAATAGGTTCAAGATTTGTAGCGGATATGGCCTCAAGGAAATGTCCTTCATATTCAGTTCAGATTTTAGAACCAGGA
TCAAAACCTGTAGAAACTGTAATAACACTATTTTCTAAGAAATTTTCAGCAGAAATCCAAGAATGGTGGTACAGCAAAAA
ACCAGCTTCAAAAGAAGCTGGTAATGTATATCCTAATTGTGTAAATTAG

Upstream 100 bases:

>100_bases
TGAAGAAGAGCTTTACTAATTTATAAAAATTAATTTTAATTAGTTGATATATAGAATTATTTCTGCCACTCTCTAATGAG
GTGGCTTTTTTTTTTGCGAA

Downstream 100 bases:

>100_bases
TTTTTAAGCTTTTGGCTTTGGAGGCATATAACCTTTTAGACCTGAGCATTCAAGGCTCTCAAAAGTATCAACACCTGTTC
TTGAATTTGTTCCAGTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MNKFEFFKTDAIQSSYGGQFSYKVIGPCCRLYDREELPWPCSRLAWRSKEPSWRRIGSRFVADMASRKCPSYSVQILEPG
SKPVETVITLFSKKFSAEIQEWWYSKKPASKEAGNVYPNCVN

Sequences:

>Translated_122_residues
MNKFEFFKTDAIQSSYGGQFSYKVIGPCCRLYDREELPWPCSRLAWRSKEPSWRRIGSRFVADMASRKCPSYSVQILEPG
SKPVETVITLFSKKFSAEIQEWWYSKKPASKEAGNVYPNCVN
>Mature_122_residues
MNKFEFFKTDAIQSSYGGQFSYKVIGPCCRLYDREELPWPCSRLAWRSKEPSWRRIGSRFVADMASRKCPSYSVQILEPG
SKPVETVITLFSKKFSAEIQEWWYSKKPASKEAGNVYPNCVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14134; Mature: 14134

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFEFFKTDAIQSSYGGQFSYKVIGPCCRLYDREELPWPCSRLAWRSKEPSWRRIGSRF
CCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHH
VADMASRKCPSYSVQILEPGSKPVETVITLFSKKFSAEIQEWWYSKKPASKEAGNVYPNC
HHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
VN
CC
>Mature Secondary Structure
MNKFEFFKTDAIQSSYGGQFSYKVIGPCCRLYDREELPWPCSRLAWRSKEPSWRRIGSRF
CCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHH
VADMASRKCPSYSVQILEPGSKPVETVITLFSKKFSAEIQEWWYSKKPASKEAGNVYPNC
HHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
VN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA