Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966740

Identifier: 123966740

GI number: 123966740

Start: 1341954

End: 1342697

Strand: Reverse

Name: 123966740

Synonym: P9515_15071

Alternate gene names: NA

Gene position: 1342697-1341954 (Counterclockwise)

Preceding gene: 123966742

Following gene: 123966737

Centisome position: 78.79

GC content: 29.57

Gene sequence:

>744_bases
TTGAAAAAAGATGATTTTATATTAAAAGAGTTTAGAGATCATGCTTTTGATTTGAAATCACACTTAATAGAATTCTTATC
TATTGATGAAAGTGATTTGGATGGGTTCCTAGAAAACGCAAAGATGGATTTGGCAAATCTTCATCCCGGAAATAATTTAA
ATGAGGCTGAAGATTTTTATAAAGAAATTGTAGGTGATAAACATTTGGCTGATTTGGCCGCTTGGCATATTTCAAGTAAA
GATTATATTTCTGATACGTTAAAACTTCAGCAGTTATTTTCACAGAAATTAGTCCTTGATTTTGGAGGAGGGATTGGCAC
ACATGCTTTGGCAAATGCAATGTCTCCTAAGGTCGAACATGTTTTTTTTGTTGATATTAATCAAACAAATAGAAATTTTG
TTGAATATAGAGCTCAAAAACTAGGTGTGAGTAATAAACTCACTTTTTGTAAAACAATTGATGAAACTGAAATTTCTAGA
TTTGATACGATCGTATGTCTTGATGTCTTGGAGCATTTATCTGATCCGGCATTTCAGCTAAATACCTTTTACGAAATTAT
GGGCCCAAAATCTATAGGATTATTTAATTGGTACTTTTATAAAGGAGAAAAAAATGAGTATCCTTTCCATATTGATGATG
AACAAATAGTTGAAAAATTTTTTAAGACTCTTCAATCAAAATTTGTAGAAGTTTTTCATCCTATTTTAATTACAACAAGA
ACCTATAAAAAATTTAGAGAATAA

Upstream 100 bases:

>100_bases
ATAAATCCATCTTTGATTTCCATTTTAATATTAAGATTACTATGTGAACTATTTCTTACTATTTTATTATTTTTAAATAA
GGAATTATTTAGGCAAGAAA

Downstream 100 bases:

>100_bases
TATTTACTCTTTTCCTATTTCTTAAATTCCTTTTAATACTATCAAAGCTTACAGTGCCTTCTTTAAGTGCAAAAAGTGTA
TCATCCTTACCCTTGCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKKDDFILKEFRDHAFDLKSHLIEFLSIDESDLDGFLENAKMDLANLHPGNNLNEAEDFYKEIVGDKHLADLAAWHISSK
DYISDTLKLQQLFSQKLVLDFGGGIGTHALANAMSPKVEHVFFVDINQTNRNFVEYRAQKLGVSNKLTFCKTIDETEISR
FDTIVCLDVLEHLSDPAFQLNTFYEIMGPKSIGLFNWYFYKGEKNEYPFHIDDEQIVEKFFKTLQSKFVEVFHPILITTR
TYKKFRE

Sequences:

>Translated_247_residues
MKKDDFILKEFRDHAFDLKSHLIEFLSIDESDLDGFLENAKMDLANLHPGNNLNEAEDFYKEIVGDKHLADLAAWHISSK
DYISDTLKLQQLFSQKLVLDFGGGIGTHALANAMSPKVEHVFFVDINQTNRNFVEYRAQKLGVSNKLTFCKTIDETEISR
FDTIVCLDVLEHLSDPAFQLNTFYEIMGPKSIGLFNWYFYKGEKNEYPFHIDDEQIVEKFFKTLQSKFVEVFHPILITTR
TYKKFRE
>Mature_247_residues
MKKDDFILKEFRDHAFDLKSHLIEFLSIDESDLDGFLENAKMDLANLHPGNNLNEAEDFYKEIVGDKHLADLAAWHISSK
DYISDTLKLQQLFSQKLVLDFGGGIGTHALANAMSPKVEHVFFVDINQTNRNFVEYRAQKLGVSNKLTFCKTIDETEISR
FDTIVCLDVLEHLSDPAFQLNTFYEIMGPKSIGLFNWYFYKGEKNEYPFHIDDEQIVEKFFKTLQSKFVEVFHPILITTR
TYKKFRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28783; Mature: 28783

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDDFILKEFRDHAFDLKSHLIEFLSIDESDLDGFLENAKMDLANLHPGNNLNEAEDFY
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
KEIVGDKHLADLAAWHISSKDYISDTLKLQQLFSQKLVLDFGGGIGTHALANAMSPKVEH
HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCE
VFFVDINQTNRNFVEYRAQKLGVSNKLTFCKTIDETEISRFDTIVCLDVLEHLSDPAFQL
EEEEEECCCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
NTFYEIMGPKSIGLFNWYFYKGEKNEYPFHIDDEQIVEKFFKTLQSKFVEVFHPILITTR
HHHHHHCCCCCCCEEEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYKKFRE
HHHHHCC
>Mature Secondary Structure
MKKDDFILKEFRDHAFDLKSHLIEFLSIDESDLDGFLENAKMDLANLHPGNNLNEAEDFY
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
KEIVGDKHLADLAAWHISSKDYISDTLKLQQLFSQKLVLDFGGGIGTHALANAMSPKVEH
HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCE
VFFVDINQTNRNFVEYRAQKLGVSNKLTFCKTIDETEISRFDTIVCLDVLEHLSDPAFQL
EEEEEECCCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
NTFYEIMGPKSIGLFNWYFYKGEKNEYPFHIDDEQIVEKFFKTLQSKFVEVFHPILITTR
HHHHHHCCCCCCCEEEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYKKFRE
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA