| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is msrAB [H]
Identifier: 123966727
GI number: 123966727
Start: 1328783
End: 1329388
Strand: Reverse
Name: msrAB [H]
Synonym: P9515_14941
Alternate gene names: 123966727
Gene position: 1329388-1328783 (Counterclockwise)
Preceding gene: 123966728
Following gene: 123966724
Centisome position: 78.01
GC content: 32.34
Gene sequence:
>606_bases ATGACTTATTTTTTCTCACTAATTATTGTATTTTCAATAATAGTAAATCCTATAAATACTTTCGCTGAAGAAGTAACCCT CGCTGGAGGATGTTTTTGGTGTTTAGAGCATGATTTAGAGTCATTAAAAGGGGTTAATTCAGTTATTAGTGGATACTCCG GAGGGAATTTACAAAACCCTACTTATGAAAATCATGATGGACACCAAGAAGTTGTTTTAGTAGATTATGACTCTGAAGAG GTGGCTTTATCAGAAATATACAGAATATACCTAAGAAATATTGATCCACTTGATGGAGAAGGTCAATTTTGCGATAGAGG GAACTCTTATAGACCTGTAATTTTTTTTGAAACTTCAGATGAAAAGAATGAAGCAAGTAAATCCCTCCTTTCTGCTTCAA AAGAATTAGGCGTCAAATTAGAACAAATTAATGTTGAACTAAAACCAAAAAGTCAGTTTTGGGAAGCGGAGGATTATCAT CAAGATTTTGCTATTAGGAATGAATTAAAATATAAGTTCTATAGATTCTCTTGTGGCAGAGATCAGAAATTAGATAAAAT ATGGAAAGACAATGCTAGATCAATGAATGCTTGGTCTCAAGAATAA
Upstream 100 bases:
>100_bases GGTTATGCTCAATTAAAGAAAGAGTTAGGACAACAAGGTGTGGCCAAAAGAGCTGCTGAAGAGATTATTAATTCTTTAAT TTGATGCTTATAATTGAAAA
Downstream 100 bases:
>100_bases TTATTTATTATCTTGACGTTTATTTTTAATCCATTGGACTAAAGTTTTAACTCCGAATCCTGTAGCTCCTAAGGGGTTAA TTCCTTTACTTTTGTCAGTC
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Peptide methionine sulfoxide reductase msrA; Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase; Peptide methionine sulfoxide reductase msrB; Peptide-methionine (R)-S-oxide reductase [H]
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTYFFSLIIVFSIIVNPINTFAEEVTLAGGCFWCLEHDLESLKGVNSVISGYSGGNLQNPTYENHDGHQEVVLVDYDSEE VALSEIYRIYLRNIDPLDGEGQFCDRGNSYRPVIFFETSDEKNEASKSLLSASKELGVKLEQINVELKPKSQFWEAEDYH QDFAIRNELKYKFYRFSCGRDQKLDKIWKDNARSMNAWSQE
Sequences:
>Translated_201_residues MTYFFSLIIVFSIIVNPINTFAEEVTLAGGCFWCLEHDLESLKGVNSVISGYSGGNLQNPTYENHDGHQEVVLVDYDSEE VALSEIYRIYLRNIDPLDGEGQFCDRGNSYRPVIFFETSDEKNEASKSLLSASKELGVKLEQINVELKPKSQFWEAEDYH QDFAIRNELKYKFYRFSCGRDQKLDKIWKDNARSMNAWSQE >Mature_200_residues TYFFSLIIVFSIIVNPINTFAEEVTLAGGCFWCLEHDLESLKGVNSVISGYSGGNLQNPTYENHDGHQEVVLVDYDSEEV ALSEIYRIYLRNIDPLDGEGQFCDRGNSYRPVIFFETSDEKNEASKSLLSASKELGVKLEQINVELKPKSQFWEAEDYHQ DFAIRNELKYKFYRFSCGRDQKLDKIWKDNARSMNAWSQE
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the msrB Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI208609995, Length=163, Percent_Identity=31.9018404907975, Blast_Score=85, Evalue=4e-17, Organism=Homo sapiens, GI6912516, Length=163, Percent_Identity=31.9018404907975, Blast_Score=85, Evalue=5e-17, Organism=Escherichia coli, GI1790665, Length=151, Percent_Identity=32.4503311258278, Blast_Score=81, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17533973, Length=149, Percent_Identity=28.1879194630872, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI24664627, Length=153, Percent_Identity=26.797385620915, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002579 - InterPro: IPR011057 - InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR; PF01641 SelR [H]
EC number: =1.8.4.11; =1.8.4.12 [H]
Molecular weight: Translated: 23226; Mature: 23095
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYFFSLIIVFSIIVNPINTFAEEVTLAGGCFWCLEHDLESLKGVNSVISGYSGGNLQNP CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TYENHDGHQEVVLVDYDSEEVALSEIYRIYLRNIDPLDGEGQFCDRGNSYRPVIFFETSD CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCC EKNEASKSLLSASKELGVKLEQINVELKPKSQFWEAEDYHQDFAIRNELKYKFYRFSCGR CHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCC DQKLDKIWKDNARSMNAWSQE CHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TYFFSLIIVFSIIVNPINTFAEEVTLAGGCFWCLEHDLESLKGVNSVISGYSGGNLQNP HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TYENHDGHQEVVLVDYDSEEVALSEIYRIYLRNIDPLDGEGQFCDRGNSYRPVIFFETSD CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCC EKNEASKSLLSASKELGVKLEQINVELKPKSQFWEAEDYHQDFAIRNELKYKFYRFSCGR CHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCC DQKLDKIWKDNARSMNAWSQE CHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]