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The map label for this gene is codA [H]

Identifier: 123966698

GI number: 123966698

Start: 1302094

End: 1303326

Strand: Reverse

Name: codA [H]

Synonym: P9515_14651

Alternate gene names: 123966698

Gene position: 1303326-1302094 (Counterclockwise)

Preceding gene: 123966705

Following gene: 123966697

Centisome position: 76.48

GC content: 30.66

Gene sequence:

>1233_bases
TTGAATACTTCAGGGAATTCAGAGGTTCTTATTCCTAGATGCCTTTGCGAAATAGAATATACCGATAACCTCAATGTAGA
TCTTGAGGATTTAGCTTCTGTTTTTGTTGCTTGGGAAAAGGGAATTGTTTCTGAATTAAAACCTATAAATATCGAAAATA
CAAAGCCAAAAAAAATTCTATTTCCAAGATTTGTTGAAACTCATTCACACCTTGACAAATCTTTCACTTGGCAAGAATTC
CCTAATTTCAAATCAAACTATGAAGAAGCATTATCTGTGAATCTAGAAGAGCATATAACTAGAACTACAGAAAAAGTTTT
AGATAGAGCTGAAAGATCGTTAAACCTTGCCCTTAAAAATGGTTATAGAGCTATAAGAAGTCATATTGATACTAGCGATG
CTTTTGAAAATGATATTTGGAGTGAACTTTTTAATTTGCAAAAAAAATATTCTTCTAAGTTGAAATTACAATTTGTAGCT
TTATCACCGTTAGAATTTTGGGATACCACTAACGGAGAGGAATTAGCAAAAAAGTTTTCTAAGGAAAATGGTATTTTAGG
AGGAGTTCTTGTTCCACCTTTTAAAAAAGCAAAAGTAAAATATTTTCTTTCTAAGATGCTCTTACTAGCAGATAAATATA
ATTTAGAAATTGACCTTCATATAGATGAATCAAATATTGAGCCTGGAGCGGGTATTAAAGTATTATTGGAAACTATTGAA
AAACTAAATATTAAAGTTCCCATAACTTGTAGTCATTTAAGTAGTATTTTATCTCTAAAGGATAATGAAATATTAAATTT
GGGAAGAAAAATTGCAGATAAGAATATTAAAGTAATTGCACTCCCTCTTACAAATTTTTGGTTGCTTAATCGTAATGATA
AAAGTACTTCCTTAAATAGACCAGTGGCACCAATCAAGCAATTACAAAAATCATTAGTTGATGTATCCATTGGAAGTGAT
AATGTTCAAGATCCATGGTATTCATTTGGTAGTTATGATCCTTTTTACTTGATGACTTGTGCAATGCCGATGCTTCAATT
AAGTCCTTGGGAAAGATTGACTTTATCTTCTATGCTGTTAGCACCAAGCAGGTTATTAAATCTAAGTTGGGATGGGTTAA
TTAAAAAAGGTTGTCCTGCTGATTTTGTAATAGTAGATGCTGAAAAGTGGGCAGATATTTTTTCAAGTAATTTAAAAAAA
GATGTCATTATAAAAGGCGAATTGTATAGCTAA

Upstream 100 bases:

>100_bases
TGCTTATTTAAATTTTTAAGAAAATTTTTAATTATTTTCTTATTTCTATCTAACTTTTATTAATGTTTTAAAATAAACTA
ACTTAAAAAAAAAAGTCTTT

Downstream 100 bases:

>100_bases
TCAATTAGTTTATATTTAAGTTAGGAAATTATTATTAATGTCATCAAGAAAAACAAAATTAATAGAAAAATTTAAAAAAA
TAGATAATTTAGAGATTATT

Product: putative cytosine deaminase

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MNTSGNSEVLIPRCLCEIEYTDNLNVDLEDLASVFVAWEKGIVSELKPINIENTKPKKILFPRFVETHSHLDKSFTWQEF
PNFKSNYEEALSVNLEEHITRTTEKVLDRAERSLNLALKNGYRAIRSHIDTSDAFENDIWSELFNLQKKYSSKLKLQFVA
LSPLEFWDTTNGEELAKKFSKENGILGGVLVPPFKKAKVKYFLSKMLLLADKYNLEIDLHIDESNIEPGAGIKVLLETIE
KLNIKVPITCSHLSSILSLKDNEILNLGRKIADKNIKVIALPLTNFWLLNRNDKSTSLNRPVAPIKQLQKSLVDVSIGSD
NVQDPWYSFGSYDPFYLMTCAMPMLQLSPWERLTLSSMLLAPSRLLNLSWDGLIKKGCPADFVIVDAEKWADIFSSNLKK
DVIIKGELYS

Sequences:

>Translated_410_residues
MNTSGNSEVLIPRCLCEIEYTDNLNVDLEDLASVFVAWEKGIVSELKPINIENTKPKKILFPRFVETHSHLDKSFTWQEF
PNFKSNYEEALSVNLEEHITRTTEKVLDRAERSLNLALKNGYRAIRSHIDTSDAFENDIWSELFNLQKKYSSKLKLQFVA
LSPLEFWDTTNGEELAKKFSKENGILGGVLVPPFKKAKVKYFLSKMLLLADKYNLEIDLHIDESNIEPGAGIKVLLETIE
KLNIKVPITCSHLSSILSLKDNEILNLGRKIADKNIKVIALPLTNFWLLNRNDKSTSLNRPVAPIKQLQKSLVDVSIGSD
NVQDPWYSFGSYDPFYLMTCAMPMLQLSPWERLTLSSMLLAPSRLLNLSWDGLIKKGCPADFVIVDAEKWADIFSSNLKK
DVIIKGELYS
>Mature_410_residues
MNTSGNSEVLIPRCLCEIEYTDNLNVDLEDLASVFVAWEKGIVSELKPINIENTKPKKILFPRFVETHSHLDKSFTWQEF
PNFKSNYEEALSVNLEEHITRTTEKVLDRAERSLNLALKNGYRAIRSHIDTSDAFENDIWSELFNLQKKYSSKLKLQFVA
LSPLEFWDTTNGEELAKKFSKENGILGGVLVPPFKKAKVKYFLSKMLLLADKYNLEIDLHIDESNIEPGAGIKVLLETIE
KLNIKVPITCSHLSSILSLKDNEILNLGRKIADKNIKVIALPLTNFWLLNRNDKSTSLNRPVAPIKQLQKSLVDVSIGSD
NVQDPWYSFGSYDPFYLMTCAMPMLQLSPWERLTLSSMLLAPSRLLNLSWDGLIKKGCPADFVIVDAEKWADIFSSNLKK
DVIIKGELYS

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=355, Percent_Identity=25.3521126760563, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1786517, Length=352, Percent_Identity=24.1477272727273, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 46662; Mature: 46662

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSGNSEVLIPRCLCEIEYTDNLNVDLEDLASVFVAWEKGIVSELKPINIENTKPKKIL
CCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
FPRFVETHSHLDKSFTWQEFPNFKSNYEEALSVNLEEHITRTTEKVLDRAERSLNLALKN
CHHHHHHHHHHCCCCCHHHCCCHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GYRAIRSHIDTSDAFENDIWSELFNLQKKYSSKLKLQFVALSPLEFWDTTNGEELAKKFS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHCCCCCHHHHHHHHH
KENGILGGVLVPPFKKAKVKYFLSKMLLLADKYNLEIDLHIDESNIEPGAGIKVLLETIE
HCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHH
KLNIKVPITCSHLSSILSLKDNEILNLGRKIADKNIKVIALPLTNFWLLNRNDKSTSLNR
HCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCC
PVAPIKQLQKSLVDVSIGSDNVQDPWYSFGSYDPFYLMTCAMPMLQLSPWERLTLSSMLL
CCHHHHHHHHHHHEEECCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
APSRLLNLSWDGLIKKGCPADFVIVDAEKWADIFSSNLKKDVIIKGELYS
CHHHHHCCCHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCCEEEECCCCC
>Mature Secondary Structure
MNTSGNSEVLIPRCLCEIEYTDNLNVDLEDLASVFVAWEKGIVSELKPINIENTKPKKIL
CCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
FPRFVETHSHLDKSFTWQEFPNFKSNYEEALSVNLEEHITRTTEKVLDRAERSLNLALKN
CHHHHHHHHHHCCCCCHHHCCCHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GYRAIRSHIDTSDAFENDIWSELFNLQKKYSSKLKLQFVALSPLEFWDTTNGEELAKKFS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHCCCCCHHHHHHHHH
KENGILGGVLVPPFKKAKVKYFLSKMLLLADKYNLEIDLHIDESNIEPGAGIKVLLETIE
HCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHH
KLNIKVPITCSHLSSILSLKDNEILNLGRKIADKNIKVIALPLTNFWLLNRNDKSTSLNR
HCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCC
PVAPIKQLQKSLVDVSIGSDNVQDPWYSFGSYDPFYLMTCAMPMLQLSPWERLTLSSMLL
CCHHHHHHHHHHHEEECCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
APSRLLNLSWDGLIKKGCPADFVIVDAEKWADIFSSNLKKDVIIKGELYS
CHHHHHCCCHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]