| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966690
Identifier: 123966690
GI number: 123966690
Start: 1292184
End: 1292852
Strand: Reverse
Name: 123966690
Synonym: P9515_14571
Alternate gene names: NA
Gene position: 1292852-1292184 (Counterclockwise)
Preceding gene: 123966691
Following gene: 123966686
Centisome position: 75.86
GC content: 34.38
Gene sequence:
>669_bases ATGCAGGTTGTAATAGTAACTGGAATCATTGCTGGATTTGTTCATGTAGTAAGTGGTGCTGATCATCTTATTGCCATGGC ACCATCAGCAATTACAAGTCCAAAAATTGCAGCAAAAAATAGTATCTCATGGGGTTTAGGACATTCTTCAGGAGTGATAT TTTTAGCTGTTCTAGCAGTTTTCATAAAGGATATTACCCCTTTAAGTAAATTTTCTAACTTTGCTGAATTTTTTGTTGGA ATCTCACTTCTTATTGTTGGAGTCTTTGCCATAAAAAATTCTTTACCTTTAAATATTCACTCTCATTCTCATCAACATAA TGGCGTAGCTCATCATCATCTTCATTTTCATAGTGAAGCAAAAAAAAAGGATAATAAACATTCACATGCATTGACAGGTT TAGGTCTCCTTCATGGTTTAGCAGGCGGTTCTCATATTCTTGCAGTACTTCCAGCATTAGCTTTACCGCTTATTAGTGCG TCTGCTTATTTGATATCGTATTTGATTGGTTCTTTAGCAAGTATGATTTTATTTACTGGTCTAATATCTTTAACAACTTT AAATACAGGGCAAAAATTTCTTAGAAGGTTAATAGCTTTTGCTGGGGGCTTATCTTTTTCTATGGGCTTATTTTGGGTGC AAAAGAGTACTGCTCTTTTTTTGACCTAA
Upstream 100 bases:
>100_bases ATATTGAACACTCTTTTAAAAAATTATTTAAATCAATTTAATTTAGGGTTGATATTTGTGCTATAAATCTGAGTATTATA AGGTTGTATTTTATTTATAA
Downstream 100 bases:
>100_bases AAGATTTTTTTAATACTAGAAGTAACTATTCCAATAATTTTTTCATTGCTAATAGAACCAAATTTATTGCTGTCATCACT ATATTCAATATTATCCCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MQVVIVTGIIAGFVHVVSGADHLIAMAPSAITSPKIAAKNSISWGLGHSSGVIFLAVLAVFIKDITPLSKFSNFAEFFVG ISLLIVGVFAIKNSLPLNIHSHSHQHNGVAHHHLHFHSEAKKKDNKHSHALTGLGLLHGLAGGSHILAVLPALALPLISA SAYLISYLIGSLASMILFTGLISLTTLNTGQKFLRRLIAFAGGLSFSMGLFWVQKSTALFLT
Sequences:
>Translated_222_residues MQVVIVTGIIAGFVHVVSGADHLIAMAPSAITSPKIAAKNSISWGLGHSSGVIFLAVLAVFIKDITPLSKFSNFAEFFVG ISLLIVGVFAIKNSLPLNIHSHSHQHNGVAHHHLHFHSEAKKKDNKHSHALTGLGLLHGLAGGSHILAVLPALALPLISA SAYLISYLIGSLASMILFTGLISLTTLNTGQKFLRRLIAFAGGLSFSMGLFWVQKSTALFLT >Mature_222_residues MQVVIVTGIIAGFVHVVSGADHLIAMAPSAITSPKIAAKNSISWGLGHSSGVIFLAVLAVFIKDITPLSKFSNFAEFFVG ISLLIVGVFAIKNSLPLNIHSHSHQHNGVAHHHLHFHSEAKKKDNKHSHALTGLGLLHGLAGGSHILAVLPALALPLISA SAYLISYLIGSLASMILFTGLISLTTLNTGQKFLRRLIAFAGGLSFSMGLFWVQKSTALFLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23496; Mature: 23496
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVVIVTGIIAGFVHVVSGADHLIAMAPSAITSPKIAAKNSISWGLGHSSGVIFLAVLAV CEEEEEHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH FIKDITPLSKFSNFAEFFVGISLLIVGVFAIKNSLPLNIHSHSHQHNGVAHHHLHFHSEA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHEEHHHHH KKKDNKHSHALTGLGLLHGLAGGSHILAVLPALALPLISASAYLISYLIGSLASMILFTG HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LISLTTLNTGQKFLRRLIAFAGGLSFSMGLFWVQKSTALFLT HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHEEECCCEEEEC >Mature Secondary Structure MQVVIVTGIIAGFVHVVSGADHLIAMAPSAITSPKIAAKNSISWGLGHSSGVIFLAVLAV CEEEEEHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH FIKDITPLSKFSNFAEFFVGISLLIVGVFAIKNSLPLNIHSHSHQHNGVAHHHLHFHSEA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHEEHHHHH KKKDNKHSHALTGLGLLHGLAGGSHILAVLPALALPLISASAYLISYLIGSLASMILFTG HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LISLTTLNTGQKFLRRLIAFAGGLSFSMGLFWVQKSTALFLT HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA