| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966645
Identifier: 123966645
GI number: 123966645
Start: 1250837
End: 1251766
Strand: Direct
Name: 123966645
Synonym: P9515_14121
Alternate gene names: NA
Gene position: 1250837-1251766 (Clockwise)
Preceding gene: 123966644
Following gene: 123966646
Centisome position: 73.4
GC content: 24.41
Gene sequence:
>930_bases ATGAAAAATTTAGTATTTATACTCGGGAGTAATGGCTATGTAGGTAGTGCGCTAGTTAAAAAATTCATAAGTAAAGATAA CTTTGTGATTGGACTAGGTAGATCGGAAACCTCTAGGCAATATAAAGAAAAATATATAAAAGATTCAAATTTTCACTACT TTTCTTTAAAAGACAAAAATATACTAAGTATAAAATCTCAAATTAAAGACTATGTGAGTGAGTTCAATATGAATTCCATA TTTATTAATTCAGCATGGCATGGTGATAAATCACTCTCAGATGGGAACTTATCTGAACAAATTGCAAATATTTATTTATC TAATGACGCAATTAAATTAGCAACAGAAATTAGATGTGATAAATTTTTGTATATTGGAAGTGTTTTTGAAAATTATATTG ATAAATTTACTAATAGTAATTGGTATGAACATAAATATAATTTCAAAGATCAATTAAATTATTCTTTAGCAAAAAATATT TGTAGAGATTTTAATAGACTGGTCTCATATTTACAAAAAATTGAATATATTCATTGCTCATTTTCAGTATTTATTGATCA AGATTTAAGTGGCAAAGGATATATACCTTCAACCCTAAAAAAAATATCGAAAGGATTAGAATATAGTGAACCTGAGAATA AGGAACTTTTTGATATTACTTTATTAGATGAAGGTTGTGAGGCTATATATTTGTTAAGTCAGAAGGCCAAAATCAATAAG AATTACTATATTGGTACTTCATTTCCAAAAACATTAAAAGATATATTTATTACTTTTGAAGAAGCAAAATTAAAAAAACA TAAAAGTCATGAAATATTATATGAGTCACCTTATAATGATTTATTTTGTATTAATAACCTTGAAAAAGATATCGGTTATA AACCAACAAAAACTTTTAACAAATTTTCCTTTGAATTTTTTAATAAATGA
Upstream 100 bases:
>100_bases TATTAAATATTCAATGGCCAAATTCTCCATTAAAATTATCTGCCAAAGACTTGAATGGTAAAACATTTAATGAAATCAAA CTAGAGATTTTAAATAGAGT
Downstream 100 bases:
>100_bases ATACTGCCATTGTTTCAGGAGCTACTGGTTTTATTGGCTCAACCTTAGTAAATTATTTACTAAATAATAAATATAAAGTA ATAGCATTAGGAAGGAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKNLVFILGSNGYVGSALVKKFISKDNFVIGLGRSETSRQYKEKYIKDSNFHYFSLKDKNILSIKSQIKDYVSEFNMNSI FINSAWHGDKSLSDGNLSEQIANIYLSNDAIKLATEIRCDKFLYIGSVFENYIDKFTNSNWYEHKYNFKDQLNYSLAKNI CRDFNRLVSYLQKIEYIHCSFSVFIDQDLSGKGYIPSTLKKISKGLEYSEPENKELFDITLLDEGCEAIYLLSQKAKINK NYYIGTSFPKTLKDIFITFEEAKLKKHKSHEILYESPYNDLFCINNLEKDIGYKPTKTFNKFSFEFFNK
Sequences:
>Translated_309_residues MKNLVFILGSNGYVGSALVKKFISKDNFVIGLGRSETSRQYKEKYIKDSNFHYFSLKDKNILSIKSQIKDYVSEFNMNSI FINSAWHGDKSLSDGNLSEQIANIYLSNDAIKLATEIRCDKFLYIGSVFENYIDKFTNSNWYEHKYNFKDQLNYSLAKNI CRDFNRLVSYLQKIEYIHCSFSVFIDQDLSGKGYIPSTLKKISKGLEYSEPENKELFDITLLDEGCEAIYLLSQKAKINK NYYIGTSFPKTLKDIFITFEEAKLKKHKSHEILYESPYNDLFCINNLEKDIGYKPTKTFNKFSFEFFNK >Mature_309_residues MKNLVFILGSNGYVGSALVKKFISKDNFVIGLGRSETSRQYKEKYIKDSNFHYFSLKDKNILSIKSQIKDYVSEFNMNSI FINSAWHGDKSLSDGNLSEQIANIYLSNDAIKLATEIRCDKFLYIGSVFENYIDKFTNSNWYEHKYNFKDQLNYSLAKNI CRDFNRLVSYLQKIEYIHCSFSVFIDQDLSGKGYIPSTLKKISKGLEYSEPENKELFDITLLDEGCEAIYLLSQKAKINK NYYIGTSFPKTLKDIFITFEEAKLKKHKSHEILYESPYNDLFCINNLEKDIGYKPTKTFNKFSFEFFNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36110; Mature: 36110
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLVFILGSNGYVGSALVKKFISKDNFVIGLGRSETSRQYKEKYIKDSNFHYFSLKDKN CCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCC ILSIKSQIKDYVSEFNMNSIFINSAWHGDKSLSDGNLSEQIANIYLSNDAIKLATEIRCD HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHEEECCCCEEHHHHHCHH KFLYIGSVFENYIDKFTNSNWYEHKYNFKDQLNYSLAKNICRDFNRLVSYLQKIEYIHCS HHHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEE FSVFIDQDLSGKGYIPSTLKKISKGLEYSEPENKELFDITLLDEGCEAIYLLSQKAKINK EEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCC NYYIGTSFPKTLKDIFITFEEAKLKKHKSHEILYESPYNDLFCINNLEKDIGYKPTKTFN CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCHHHCCCCCCCCHH KFSFEFFNK HCCHHCCCC >Mature Secondary Structure MKNLVFILGSNGYVGSALVKKFISKDNFVIGLGRSETSRQYKEKYIKDSNFHYFSLKDKN CCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCC ILSIKSQIKDYVSEFNMNSIFINSAWHGDKSLSDGNLSEQIANIYLSNDAIKLATEIRCD HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHEEECCCCEEHHHHHCHH KFLYIGSVFENYIDKFTNSNWYEHKYNFKDQLNYSLAKNICRDFNRLVSYLQKIEYIHCS HHHHHHHHHHHHHHHHCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEE FSVFIDQDLSGKGYIPSTLKKISKGLEYSEPENKELFDITLLDEGCEAIYLLSQKAKINK EEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCC NYYIGTSFPKTLKDIFITFEEAKLKKHKSHEILYESPYNDLFCINNLEKDIGYKPTKTFN CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCHHHCCCCCCCCHH KFSFEFFNK HCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA