| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966635
Identifier: 123966635
GI number: 123966635
Start: 1239757
End: 1241346
Strand: Direct
Name: 123966635
Synonym: P9515_14021
Alternate gene names: NA
Gene position: 1239757-1241346 (Clockwise)
Preceding gene: 123966634
Following gene: 123966636
Centisome position: 72.75
GC content: 26.48
Gene sequence:
>1590_bases ATGAAAATACAGCTAGTTATTCCAATGTCCGGTATTGGTAAAAGATTTAAAGATGCAGGTTATACTACCCCAAAACCACT TATAAAAATAAGAGGCAAAGAGATAATAAATCATGTAGTTAATATGTTTGGGGAAATAGAAAGAGTTATTTTCATTTGTA ATGAAGAGCATCTTCATGATAAGAAATTAAACCTAAGCAAAATATTAAGTAATCTACATCCAAAAACAACTGTTGTTTCT ATTAAGCCGCATAAGAAAGGTCCAATTCATGCTGTTTTAGAAGCCGAATCAATTTTGGAATCCTTGAAACCTACAATAGT TAATTATTGTGATTTCAATTCTTTTTTTAATTTTCCAAATTTTATAAATCATTTAAAAAAAGATCAGCCAGATGGATGTG TTTTTACCTACACAGGTTTTCATCCACATATGTTAAAGAACACAAATTATGCTTATGTGAAAAAATACAAGAATTCCGTT GTTGATATTCAAGAGAAAAAGCCTTTTACTGAAAACCCAATGAATGAAGAAGTCTCAAGCGGGACTTATTACTTTAAATC AGCTAAATTGATGCTTAAATATTTTAAAAAAGCGATTTTATTAGATCTTAAAGTAAATGGAGAGTTTTATGTTTCTATGG CATATAAACCCATGATTAAAGATGGTCTAAAAATAAAAACTTTTCTAATTAATTATTTTATGCAATGGGGAACTCCTTCA GATTTGGAAGATTTCAAATGGTATTCAAATGTTTTCAAAAATATAATTAAAAAAAAGAATAATCATAAAAATATATATGA AGGATGTTTATTAATGCCAATGGCTGGAGAAGGTTCTAGATTTAGAGAAAAAGGATATAAAATCCCTAAACCATTTATTA AAATTTCAGGTTCTGAAATGTATATAAAAGCAATTAAAGATTTACCAAGAATGGAAAATATAAAAATAGTTACAACAGAA AAATTAATTAAAAATAAAAAGCCTTTTTTTAATATTAAAGATAAAAAATTAAATATAAGTATAAAATCTTTAAAAACAAA ACCTGAAGGTCAAGCTTGTACTTCTCTAAAAGCTTTTGAAGATAATAGTATCAATTTAGAAAAGCCTTTAATAATAAGTG CTTGTGATATGGGAATTATTTTTGATGAAAAAAAATATCAAAAACTTATCGCCTTACAAGATATAGATATTTTAGTATGG GGATGTAAAGGTTACCCAGGTGCACAACAAAAACCTAATATGTATAGCTGGATATATAAAAATAAAAATGAAAATTATAT TTCTAATATTTCAGTAAAGAAAAACCTTTTCAATCCAAGAGAAGATTATGTTTTGATTGGTACATTTACATTTAAGAAAG CGAAGTATTTTGTGCAGTCGGCAGAACTTAGTATTGCTTGTGGAGAAAAAGTAAATGGTGAATATTATGTAGATAATGTA ATTAATAAATCTATAGAAATAGGATTAAAAGTAGCAATATTTGAAGTTGATTACTTCATATGTTGGGGGACCCCTAATGA ATTAGAAACTTACAATTATTGGGAATCATGTTTTAAAAAATGGACAGATCATCCTTATATGAAAAGATAA
Upstream 100 bases:
>100_bases CAAAAGATGTCTTGCTAAATTATTTAACAAAGGAAGAAAGAAATGAATTAATTAATTGGGATTTAGAGATTCATAGAAAA ACACTCAATAATTAAAAATC
Downstream 100 bases:
>100_bases ACTAATTTAATATTTCTAATTATAAAAATCTTAAAAATATAAAAAAAAATTTAACTAATTAAAAATATTTTAATTATTTT TTATAGAAAAAATTATTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: DTDP-Glucose Pyrophosphorylase; Pyrophosphorylase; Nucleotidyl Transferase Family; Nucleotidyltransferase; UTP-Glucose-1-Phosphate Uridylyltransferase; Phosphatase/Phosphohexomutase; Capsular Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MKIQLVIPMSGIGKRFKDAGYTTPKPLIKIRGKEIINHVVNMFGEIERVIFICNEEHLHDKKLNLSKILSNLHPKTTVVS IKPHKKGPIHAVLEAESILESLKPTIVNYCDFNSFFNFPNFINHLKKDQPDGCVFTYTGFHPHMLKNTNYAYVKKYKNSV VDIQEKKPFTENPMNEEVSSGTYYFKSAKLMLKYFKKAILLDLKVNGEFYVSMAYKPMIKDGLKIKTFLINYFMQWGTPS DLEDFKWYSNVFKNIIKKKNNHKNIYEGCLLMPMAGEGSRFREKGYKIPKPFIKISGSEMYIKAIKDLPRMENIKIVTTE KLIKNKKPFFNIKDKKLNISIKSLKTKPEGQACTSLKAFEDNSINLEKPLIISACDMGIIFDEKKYQKLIALQDIDILVW GCKGYPGAQQKPNMYSWIYKNKNENYISNISVKKNLFNPREDYVLIGTFTFKKAKYFVQSAELSIACGEKVNGEYYVDNV INKSIEIGLKVAIFEVDYFICWGTPNELETYNYWESCFKKWTDHPYMKR
Sequences:
>Translated_529_residues MKIQLVIPMSGIGKRFKDAGYTTPKPLIKIRGKEIINHVVNMFGEIERVIFICNEEHLHDKKLNLSKILSNLHPKTTVVS IKPHKKGPIHAVLEAESILESLKPTIVNYCDFNSFFNFPNFINHLKKDQPDGCVFTYTGFHPHMLKNTNYAYVKKYKNSV VDIQEKKPFTENPMNEEVSSGTYYFKSAKLMLKYFKKAILLDLKVNGEFYVSMAYKPMIKDGLKIKTFLINYFMQWGTPS DLEDFKWYSNVFKNIIKKKNNHKNIYEGCLLMPMAGEGSRFREKGYKIPKPFIKISGSEMYIKAIKDLPRMENIKIVTTE KLIKNKKPFFNIKDKKLNISIKSLKTKPEGQACTSLKAFEDNSINLEKPLIISACDMGIIFDEKKYQKLIALQDIDILVW GCKGYPGAQQKPNMYSWIYKNKNENYISNISVKKNLFNPREDYVLIGTFTFKKAKYFVQSAELSIACGEKVNGEYYVDNV INKSIEIGLKVAIFEVDYFICWGTPNELETYNYWESCFKKWTDHPYMKR >Mature_529_residues MKIQLVIPMSGIGKRFKDAGYTTPKPLIKIRGKEIINHVVNMFGEIERVIFICNEEHLHDKKLNLSKILSNLHPKTTVVS IKPHKKGPIHAVLEAESILESLKPTIVNYCDFNSFFNFPNFINHLKKDQPDGCVFTYTGFHPHMLKNTNYAYVKKYKNSV VDIQEKKPFTENPMNEEVSSGTYYFKSAKLMLKYFKKAILLDLKVNGEFYVSMAYKPMIKDGLKIKTFLINYFMQWGTPS DLEDFKWYSNVFKNIIKKKNNHKNIYEGCLLMPMAGEGSRFREKGYKIPKPFIKISGSEMYIKAIKDLPRMENIKIVTTE KLIKNKKPFFNIKDKKLNISIKSLKTKPEGQACTSLKAFEDNSINLEKPLIISACDMGIIFDEKKYQKLIALQDIDILVW GCKGYPGAQQKPNMYSWIYKNKNENYISNISVKKNLFNPREDYVLIGTFTFKKAKYFVQSAELSIACGEKVNGEYYVDNV INKSIEIGLKVAIFEVDYFICWGTPNELETYNYWESCFKKWTDHPYMKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61526; Mature: 61526
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIQLVIPMSGIGKRFKDAGYTTPKPLIKIRGKEIINHVVNMFGEIERVIFICNEEHLHD CEEEEEECCHHCCHHHHCCCCCCCCHHEEECCHHHHHHHHHHHHCCEEEEEEECCCCCCC KKLNLSKILSNLHPKTTVVSIKPHKKGPIHAVLEAESILESLKPTIVNYCDFNSFFNFPN CCCCHHHHHHCCCCCEEEEEECCCCCCCEEEEEEHHHHHHHHCHHHEECCCCHHHCCCHH FINHLKKDQPDGCVFTYTGFHPHMLKNTNYAYVKKYKNSVVDIQEKKPFTENPMNEEVSS HHHHHHCCCCCCEEEEECCCCCHHHCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCHHCC GTYYFKSAKLMLKYFKKAILLDLKVNGEFYVSMAYKPMIKDGLKIKTFLINYFMQWGTPS CEEEEHHHHHHHHHHHHHEEEEEEECCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCC DLEDFKWYSNVFKNIIKKKNNHKNIYEGCLLMPMAGEGSRFREKGYKIPKPFIKISGSEM CHHHHHHHHHHHHHHHHCCCCCCCHHCCEEEEEECCCCCHHHHCCCCCCCCEEEECCCHH YIKAIKDLPRMENIKIVTTEKLIKNKKPFFNIKDKKLNISIKSLKTKPEGQACTSLKAFE HHHHHHCCCCCCCEEEEEHHHHHCCCCCCEEECCCEEEEEEEECCCCCCCCHHHCEEECC DNSINLEKPLIISACDMGIIFDEKKYQKLIALQDIDILVWGCKGYPGAQQKPNMYSWIYK CCCCCCCCCEEEEECCCCEEECCHHHHHHHHEECCEEEEECCCCCCCCCCCCCCEEEEEE NKNENYISNISVKKNLFNPREDYVLIGTFTFKKAKYFVQSAELSIACGEKVNGEYYVDNV CCCCCEEEEEEEHHHCCCCCCCEEEEEEEEHHHHHHHHHHCCEEEEECCCCCCCEEEHHH INKSIEIGLKVAIFEVDYFICWGTPNELETYNYWESCFKKWTDHPYMKR HCCCEEEEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKIQLVIPMSGIGKRFKDAGYTTPKPLIKIRGKEIINHVVNMFGEIERVIFICNEEHLHD CEEEEEECCHHCCHHHHCCCCCCCCHHEEECCHHHHHHHHHHHHCCEEEEEEECCCCCCC KKLNLSKILSNLHPKTTVVSIKPHKKGPIHAVLEAESILESLKPTIVNYCDFNSFFNFPN CCCCHHHHHHCCCCCEEEEEECCCCCCCEEEEEEHHHHHHHHCHHHEECCCCHHHCCCHH FINHLKKDQPDGCVFTYTGFHPHMLKNTNYAYVKKYKNSVVDIQEKKPFTENPMNEEVSS HHHHHHCCCCCCEEEEECCCCCHHHCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCHHCC GTYYFKSAKLMLKYFKKAILLDLKVNGEFYVSMAYKPMIKDGLKIKTFLINYFMQWGTPS CEEEEHHHHHHHHHHHHHEEEEEEECCEEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCC DLEDFKWYSNVFKNIIKKKNNHKNIYEGCLLMPMAGEGSRFREKGYKIPKPFIKISGSEM CHHHHHHHHHHHHHHHHCCCCCCCHHCCEEEEEECCCCCHHHHCCCCCCCCEEEECCCHH YIKAIKDLPRMENIKIVTTEKLIKNKKPFFNIKDKKLNISIKSLKTKPEGQACTSLKAFE HHHHHHCCCCCCCEEEEEHHHHHCCCCCCEEECCCEEEEEEEECCCCCCCCHHHCEEECC DNSINLEKPLIISACDMGIIFDEKKYQKLIALQDIDILVWGCKGYPGAQQKPNMYSWIYK CCCCCCCCCEEEEECCCCEEECCHHHHHHHHEECCEEEEECCCCCCCCCCCCCCEEEEEE NKNENYISNISVKKNLFNPREDYVLIGTFTFKKAKYFVQSAELSIACGEKVNGEYYVDNV CCCCCEEEEEEEHHHCCCCCCCEEEEEEEEHHHHHHHHHHCCEEEEECCCCCCCEEEHHH INKSIEIGLKVAIFEVDYFICWGTPNELETYNYWESCFKKWTDHPYMKR HCCCEEEEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA