| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is epsE [H]
Identifier: 123966622
GI number: 123966622
Start: 1226660
End: 1227658
Strand: Direct
Name: epsE [H]
Synonym: P9515_13891
Alternate gene names: 123966622
Gene position: 1226660-1227658 (Clockwise)
Preceding gene: 123966621
Following gene: 123966623
Centisome position: 71.98
GC content: 25.13
Gene sequence:
>999_bases ATGAGCAATATAAAAATCAGCATATTAATGCCAGCTTATAATTCAGAGGAATTTATATCTAGATCTATTGAAAGTGTTAT AAAGCAAAGTTTTTTAAATTTTGAATTAATTATAGTTGATGATGGGAGTAGAGATGCAACAAAAGAAATTGTTAATATGT ACAAACACAATAATAACAAAATTAAGCTTTTCACTAAATCCAACTCTGGTATCACAGAAACATTAAATTTTGGCTTAAAA AAATGTAAAGGAGAATGGATTGCGAGATTAGATAGTGATGATTTATCAAGATTTGATCGATTGGAAAAACAACTTTTAAT TGCTGAATCTAATAGAAATACTGGCTTAGTAGGTTCAGACGCCATTTTTATTGATAGCCTTGATAATAATTTATATTCTT TTTCATATCCTTCCACACATAAAGAATTAACAAATAACTTATTATCATGTAAAAAGTTTTTTCCTCACTCAAGTGCCTTT TTTAATCGTGAATTAGTTGAATCAATAGGAGCTTATAGGCAGAGAGCAGGCATTAGTGAAGATTGGGATCTTTGGCTAAG GTTAGCTAGTAAAAGCAAAATAATTAATATCAAAAAACCTCTTTTAAAAATTAGAATTCATGAAAATCGAATCTCAAATA AAAACTCTTTAAAGCAATCATTTGATACGAGATTTGTAATTGTTGCTAATTTACTTAGCACTAAAAAAAATTATGATCCA TTAGATTTATTAAGTGATGAAGAATTTATAAATTATAAAAATTATATTGAAATATTTCTCGAGAAATTAGGATTCAGTGA TTACCTAAAATTCATCTCATTTTTAAAAAATCCGATTTTAAAAAGAATTATTTTACCAACTTTTTTCTTAAGAAACATCA CAAGACCCTTCTATATTTATTCATTTATAAAATTAAAATTCTTTTCTAAAAGTATTCAAATTAAAATTGCCAAAAGTTAC TATGATAGATTTATTAGAAATAGCAAATTAATCAAATAA
Upstream 100 bases:
>100_bases TATCTAAAAGATATGATTACATGACAACATCAAATCAAATGAAAGAAGAAATATTAGCCTTAAGTAAAACTAAATTCTAA ATTTTATAATTTTAAATTTT
Downstream 100 bases:
>100_bases ATATAATATATCATCTTTAATATGTTTTTATTAAGCCAATACAAATTGAAATTGTACGGATATTTAAATCAATCATCCTA AAGTAAATAAATAATTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSNIKISILMPAYNSEEFISRSIESVIKQSFLNFELIIVDDGSRDATKEIVNMYKHNNNKIKLFTKSNSGITETLNFGLK KCKGEWIARLDSDDLSRFDRLEKQLLIAESNRNTGLVGSDAIFIDSLDNNLYSFSYPSTHKELTNNLLSCKKFFPHSSAF FNRELVESIGAYRQRAGISEDWDLWLRLASKSKIINIKKPLLKIRIHENRISNKNSLKQSFDTRFVIVANLLSTKKNYDP LDLLSDEEFINYKNYIEIFLEKLGFSDYLKFISFLKNPILKRIILPTFFLRNITRPFYIYSFIKLKFFSKSIQIKIAKSY YDRFIRNSKLIK
Sequences:
>Translated_332_residues MSNIKISILMPAYNSEEFISRSIESVIKQSFLNFELIIVDDGSRDATKEIVNMYKHNNNKIKLFTKSNSGITETLNFGLK KCKGEWIARLDSDDLSRFDRLEKQLLIAESNRNTGLVGSDAIFIDSLDNNLYSFSYPSTHKELTNNLLSCKKFFPHSSAF FNRELVESIGAYRQRAGISEDWDLWLRLASKSKIINIKKPLLKIRIHENRISNKNSLKQSFDTRFVIVANLLSTKKNYDP LDLLSDEEFINYKNYIEIFLEKLGFSDYLKFISFLKNPILKRIILPTFFLRNITRPFYIYSFIKLKFFSKSIQIKIAKSY YDRFIRNSKLIK >Mature_331_residues SNIKISILMPAYNSEEFISRSIESVIKQSFLNFELIIVDDGSRDATKEIVNMYKHNNNKIKLFTKSNSGITETLNFGLKK CKGEWIARLDSDDLSRFDRLEKQLLIAESNRNTGLVGSDAIFIDSLDNNLYSFSYPSTHKELTNNLLSCKKFFPHSSAFF NRELVESIGAYRQRAGISEDWDLWLRLASKSKIINIKKPLLKIRIHENRISNKNSLKQSFDTRFVIVANLLSTKKNYDPL DLLSDEEFINYKNYIEIFLEKLGFSDYLKFISFLKNPILKRIILPTFFLRNITRPFYIYSFIKLKFFSKSIQIKIAKSYY DRFIRNSKLIK
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=90, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 38901; Mature: 38770
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIKISILMPAYNSEEFISRSIESVIKQSFLNFELIIVDDGSRDATKEIVNMYKHNNNK CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCE IKLFTKSNSGITETLNFGLKKCKGEWIARLDSDDLSRFDRLEKQLLIAESNRNTGLVGSD EEEEECCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHEEEEECCCCCCCCCCC AIFIDSLDNNLYSFSYPSTHKELTNNLLSCKKFFPHSSAFFNRELVESIGAYRQRAGISE EEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC DWDLWLRLASKSKIINIKKPLLKIRIHENRISNKNSLKQSFDTRFVIVANLLSTKKNYDP CHHHHHHHHCCCCEEEECCCEEEEEEEHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCCC LDLLSDEEFINYKNYIEIFLEKLGFSDYLKFISFLKNPILKRIILPTFFLRNITRPFYIY HHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH SFIKLKFFSKSIQIKIAKSYYDRFIRNSKLIK HHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCC >Mature Secondary Structure SNIKISILMPAYNSEEFISRSIESVIKQSFLNFELIIVDDGSRDATKEIVNMYKHNNNK CCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCE IKLFTKSNSGITETLNFGLKKCKGEWIARLDSDDLSRFDRLEKQLLIAESNRNTGLVGSD EEEEECCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHEEEEECCCCCCCCCCC AIFIDSLDNNLYSFSYPSTHKELTNNLLSCKKFFPHSSAFFNRELVESIGAYRQRAGISE EEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC DWDLWLRLASKSKIINIKKPLLKIRIHENRISNKNSLKQSFDTRFVIVANLLSTKKNYDP CHHHHHHHHCCCCEEEECCCEEEEEEEHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCCC LDLLSDEEFINYKNYIEIFLEKLGFSDYLKFISFLKNPILKRIILPTFFLRNITRPFYIY HHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH SFIKLKFFSKSIQIKIAKSYYDRFIRNSKLIK HHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]