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The map label for this gene is lpsE [H]

Identifier: 123966614

GI number: 123966614

Start: 1216189

End: 1217313

Strand: Reverse

Name: lpsE [H]

Synonym: P9515_13811

Alternate gene names: 123966614

Gene position: 1217313-1216189 (Counterclockwise)

Preceding gene: 123966615

Following gene: 123966613

Centisome position: 71.43

GC content: 28.36

Gene sequence:

>1125_bases
ATGGATAAAAGTAAAATAAAAAGTTGTGATATTTTAATAGTTCTAAATTCCTTAGTTGCTGAAGGTTGCCCGCAACTTGC
TTTAAACTTGGCAGAGTATTGGACCTCAAAGAAAAAAAAAATTGAAATAATTTGTTTTGATAAAGATCCTCTAGAGATAT
TCAAGGAATTTGAAGAAATAAGTATTGATGTTCATTTTTATAAAGATTTTAAAAATAAATTCTTCAGGTACTTTTTTCTA
ACATACTATACTTATAAAATATGTATTAAATTAAAGCCAAAGGCTATACTTTGCTTCCCTTTTGGATGGCATGCGTTCAT
AGCGATAGGGGCAAAATTTGCAGGAGTTAGGAGTATTTGCACTCATATAGGAAATTATCCACCGATTTATGAAAAATCAA
TTCAAAAATTTAGAGTACTTGTTCATCTAGGAAGATTTTTCACTAAAAAATGTATTTGTTGTTCAGATTATATTATGCAA
GCTAGTAGAAAACACTTTTATTTACCCAATAAAGCCCTTTGCAGAGTTTATAACTGTTGTGATTTAAATAAATTTTATGA
TTCAAAAAATAAATTTGAGATTAAACCTGATAAAACTATTAACTTAGGGATGGTAGCTAGATTAGAGAAACATAAAGATC
ATGAAACGTTAATTAGATCTATATTTGAAATGAAAAAGAATGGATTAAAAGTGATTTTAAGTATTATCGGAGATGGATCA
AAAAGAAAAGAATTAGAAAAACTTTCAAAAGATCTTGGAATAGATTCAATGATAAAATTTTTGGGAGCAAGAAGAGATAT
TCCTAAAATAATATCCCAATTAGACATTTTTGTTTTTTCTGCAAAACAGGATGAGGGCTTTGGAATAGCTCTAGCTGAGG
CAATGGTAGCTGGTATTCCGATATTAGCCTCAAATGTTGGTTCATGCCTTGAGATCTTAGGAAATGGCAAGTATGGAAAT
TTCTTTAAAGAGGGCGATCCAAAAGATTTAGCAATAAAAGTTTCAGAAATGACTCATGATTCAAAAAGTATTTATGAAAA
AAGTTTAAAAGCAAGAAAATATGCTATTGATAATTTTTCTATAGAAAAAATGGCTGAAGCTTATTTTTATTATTTGATGT
TATGA

Upstream 100 bases:

>100_bases
ATAGTTTAGACATTTGAGATATAAATAAGATATAAGTAATTAAATTATTGAAATAATATTGATTTATAATTATATAAAAA
GGATTAATACAATAATTTGT

Downstream 100 bases:

>100_bases
CAATAAATTTTCATATTTTAGATGGTATTAAAATTGGAGGTATAGAAAATCTCGCTTTGACAATGTCTAGAGAGGGAATG
CCTATGGAAAAAAATTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MDKSKIKSCDILIVLNSLVAEGCPQLALNLAEYWTSKKKKIEIICFDKDPLEIFKEFEEISIDVHFYKDFKNKFFRYFFL
TYYTYKICIKLKPKAILCFPFGWHAFIAIGAKFAGVRSICTHIGNYPPIYEKSIQKFRVLVHLGRFFTKKCICCSDYIMQ
ASRKHFYLPNKALCRVYNCCDLNKFYDSKNKFEIKPDKTINLGMVARLEKHKDHETLIRSIFEMKKNGLKVILSIIGDGS
KRKELEKLSKDLGIDSMIKFLGARRDIPKIISQLDIFVFSAKQDEGFGIALAEAMVAGIPILASNVGSCLEILGNGKYGN
FFKEGDPKDLAIKVSEMTHDSKSIYEKSLKARKYAIDNFSIEKMAEAYFYYLML

Sequences:

>Translated_374_residues
MDKSKIKSCDILIVLNSLVAEGCPQLALNLAEYWTSKKKKIEIICFDKDPLEIFKEFEEISIDVHFYKDFKNKFFRYFFL
TYYTYKICIKLKPKAILCFPFGWHAFIAIGAKFAGVRSICTHIGNYPPIYEKSIQKFRVLVHLGRFFTKKCICCSDYIMQ
ASRKHFYLPNKALCRVYNCCDLNKFYDSKNKFEIKPDKTINLGMVARLEKHKDHETLIRSIFEMKKNGLKVILSIIGDGS
KRKELEKLSKDLGIDSMIKFLGARRDIPKIISQLDIFVFSAKQDEGFGIALAEAMVAGIPILASNVGSCLEILGNGKYGN
FFKEGDPKDLAIKVSEMTHDSKSIYEKSLKARKYAIDNFSIEKMAEAYFYYLML
>Mature_374_residues
MDKSKIKSCDILIVLNSLVAEGCPQLALNLAEYWTSKKKKIEIICFDKDPLEIFKEFEEISIDVHFYKDFKNKFFRYFFL
TYYTYKICIKLKPKAILCFPFGWHAFIAIGAKFAGVRSICTHIGNYPPIYEKSIQKFRVLVHLGRFFTKKCICCSDYIMQ
ASRKHFYLPNKALCRVYNCCDLNKFYDSKNKFEIKPDKTINLGMVARLEKHKDHETLIRSIFEMKKNGLKVILSIIGDGS
KRKELEKLSKDLGIDSMIKFLGARRDIPKIISQLDIFVFSAKQDEGFGIALAEAMVAGIPILASNVGSCLEILGNGKYGN
FFKEGDPKDLAIKVSEMTHDSKSIYEKSLKARKYAIDNFSIEKMAEAYFYYLML

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 43123; Mature: 43123

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKSKIKSCDILIVLNSLVAEGCPQLALNLAEYWTSKKKKIEIICFDKDPLEIFKEFEEI
CCCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHH
SIDVHFYKDFKNKFFRYFFLTYYTYKICIKLKPKAILCFPFGWHAFIAIGAKFAGVRSIC
EEEEEEHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHH
THIGNYPPIYEKSIQKFRVLVHLGRFFTKKCICCSDYIMQASRKHFYLPNKALCRVYNCC
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHC
DLNKFYDSKNKFEIKPDKTINLGMVARLEKHKDHETLIRSIFEMKKNGLKVILSIIGDGS
CCHHHHCCCCCEEECCCCEECHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCH
KRKELEKLSKDLGIDSMIKFLGARRDIPKIISQLDIFVFSAKQDEGFGIALAEAMVAGIP
HHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCCH
ILASNVGSCLEILGNGKYGNFFKEGDPKDLAIKVSEMTHDSKSIYEKSLKARKYAIDNFS
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHCCCCC
IEKMAEAYFYYLML
HHHHHHHHHHHEEC
>Mature Secondary Structure
MDKSKIKSCDILIVLNSLVAEGCPQLALNLAEYWTSKKKKIEIICFDKDPLEIFKEFEEI
CCCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHH
SIDVHFYKDFKNKFFRYFFLTYYTYKICIKLKPKAILCFPFGWHAFIAIGAKFAGVRSIC
EEEEEEHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHH
THIGNYPPIYEKSIQKFRVLVHLGRFFTKKCICCSDYIMQASRKHFYLPNKALCRVYNCC
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHC
DLNKFYDSKNKFEIKPDKTINLGMVARLEKHKDHETLIRSIFEMKKNGLKVILSIIGDGS
CCHHHHCCCCCEEECCCCEECHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCH
KRKELEKLSKDLGIDSMIKFLGARRDIPKIISQLDIFVFSAKQDEGFGIALAEAMVAGIP
HHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCCH
ILASNVGSCLEILGNGKYGNFFKEGDPKDLAIKVSEMTHDSKSIYEKSLKARKYAIDNFS
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHCCCCC
IEKMAEAYFYYLML
HHHHHHHHHHHEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]