| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966577
Identifier: 123966577
GI number: 123966577
Start: 1180069
End: 1180803
Strand: Direct
Name: 123966577
Synonym: P9515_13441
Alternate gene names: NA
Gene position: 1180069-1180803 (Clockwise)
Preceding gene: 123966573
Following gene: 123966578
Centisome position: 69.25
GC content: 25.17
Gene sequence:
>735_bases ATGATTAATAAAAATCAAAAAAACATTCTTAATAAGCTAATTGAAGATTTTAATTTTTCCAGCTCAAAAAAATATAAATT AATTTCAATATTTGGACTTTTAGGCGATTTTGATAGTTTTGAATATGCAATTAATTTAAAAAATTTTATAGACGATAATC AAAATACAGATGTAGATATTTTTGCAATCGCAATTGGAAATAATATTGGGAAAGAAAAATTTTGCAAATTCACAGGATTT CCAAATAATAATTTAGCAGTTGTCAATGATAATAAACTTCACCAAGATCTTATGGTTTCAAAAGGGGTTGATATAGGTTT AGGAGGTTGGATTAATATGTTAATTATGTTATCTGGAATAAATTCACTAAAAACCATTAAGGAGGTTATTAGGGGGTACA CAGGTGATAAAAATGCAAAGCAAATTTTTTCTGATGAAGACCAAATAAACTTATTAAATTTAATCAAATTTTCTGGAGTT TTTTTTAAATATACTTTTGGAAACGGTTATTTAAGACCTTTTGAATTAGCTACATATAGATTAAATAACATGATAGAAAT TCTTAAGAACTGGAATGACTATATTATTGATAATAAGTATTTACCTCAAAGGGGCGCTTCATTTCTTTTAAATGATCAAG ATCAAATTTTATATACATATTTTTCAAATGATGTACTCGGTTATTCTTCTAAAATGGAAGACCCAATTGCTTTTTTAACT GAGAAATGTAGATAA
Upstream 100 bases:
>100_bases GTTAAATTAATTTTTTTACAAACTTTTTCATGTAAAATTTTATACAAATTTACGTATGAAATAGTTTCTACCAGAAATTG AACTCGTTCCGCTCCTAAGC
Downstream 100 bases:
>100_bases TGAACTCTTTGAATATTGAATTTTTCGGATATTTTGCAGCAATTTTAACCACTGCTGCATTTTTACCTCAATTAATTAAA ACCCTAAAGACAAAAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MINKNQKNILNKLIEDFNFSSSKKYKLISIFGLLGDFDSFEYAINLKNFIDDNQNTDVDIFAIAIGNNIGKEKFCKFTGF PNNNLAVVNDNKLHQDLMVSKGVDIGLGGWINMLIMLSGINSLKTIKEVIRGYTGDKNAKQIFSDEDQINLLNLIKFSGV FFKYTFGNGYLRPFELATYRLNNMIEILKNWNDYIIDNKYLPQRGASFLLNDQDQILYTYFSNDVLGYSSKMEDPIAFLT EKCR
Sequences:
>Translated_244_residues MINKNQKNILNKLIEDFNFSSSKKYKLISIFGLLGDFDSFEYAINLKNFIDDNQNTDVDIFAIAIGNNIGKEKFCKFTGF PNNNLAVVNDNKLHQDLMVSKGVDIGLGGWINMLIMLSGINSLKTIKEVIRGYTGDKNAKQIFSDEDQINLLNLIKFSGV FFKYTFGNGYLRPFELATYRLNNMIEILKNWNDYIIDNKYLPQRGASFLLNDQDQILYTYFSNDVLGYSSKMEDPIAFLT EKCR >Mature_244_residues MINKNQKNILNKLIEDFNFSSSKKYKLISIFGLLGDFDSFEYAINLKNFIDDNQNTDVDIFAIAIGNNIGKEKFCKFTGF PNNNLAVVNDNKLHQDLMVSKGVDIGLGGWINMLIMLSGINSLKTIKEVIRGYTGDKNAKQIFSDEDQINLLNLIKFSGV FFKYTFGNGYLRPFELATYRLNNMIEILKNWNDYIIDNKYLPQRGASFLLNDQDQILYTYFSNDVLGYSSKMEDPIAFLT EKCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28028; Mature: 28028
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINKNQKNILNKLIEDFNFSSSKKYKLISIFGLLGDFDSFEYAINLKNFIDDNQNTDVDI CCCCHHHHHHHHHHHHCCCCCCCCEEHEEHHHHHCCCCCEEEEEEEHHHCCCCCCCCEEE FAIAIGNNIGKEKFCKFTGFPNNNLAVVNDNKLHQDLMVSKGVDIGLGGWINMLIMLSGI EEEEECCCCCHHHHEEECCCCCCCEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHCC NSLKTIKEVIRGYTGDKNAKQIFSDEDQINLLNLIKFSGVFFKYTFGNGYLRPFELATYR CHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHH LNNMIEILKNWNDYIIDNKYLPQRGASFLLNDQDQILYTYFSNDVLGYSSKMEDPIAFLT HHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCCCEEEEEECCCEECCCCCCCCHHHHHH EKCR HHCC >Mature Secondary Structure MINKNQKNILNKLIEDFNFSSSKKYKLISIFGLLGDFDSFEYAINLKNFIDDNQNTDVDI CCCCHHHHHHHHHHHHCCCCCCCCEEHEEHHHHHCCCCCEEEEEEEHHHCCCCCCCCEEE FAIAIGNNIGKEKFCKFTGFPNNNLAVVNDNKLHQDLMVSKGVDIGLGGWINMLIMLSGI EEEEECCCCCHHHHEEECCCCCCCEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHCC NSLKTIKEVIRGYTGDKNAKQIFSDEDQINLLNLIKFSGVFFKYTFGNGYLRPFELATYR CHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHH LNNMIEILKNWNDYIIDNKYLPQRGASFLLNDQDQILYTYFSNDVLGYSSKMEDPIAFLT HHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCCCEEEEEECCCEECCCCCCCCHHHHHH EKCR HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA