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The map label for this gene is 123966567

Identifier: 123966567

GI number: 123966567

Start: 1173140

End: 1174420

Strand: Reverse

Name: 123966567

Synonym: P9515_13341

Alternate gene names: NA

Gene position: 1174420-1173140 (Counterclockwise)

Preceding gene: 123966568

Following gene: 123966564

Centisome position: 68.91

GC content: 39.5

Gene sequence:

>1281_bases
ATGAAACTCTTCCAAAAAATGTTAGTTGCTACAGCTTCTGTAGGCTTAATTGCTCCTATGGCTGCTCAAGCTTCTGACGT
GTTGAACCTTGAGGGGATGAATGACTACAACAGTAGTAACAAATCATCTGCTACAAGTTTATTCGACAGTGAAACTTTCG
TTAATGAAGTTAACGAAGAACTTGCAACACTAAAAGGACGTGTTGACGGTATTGAAGCTATTCAAAATGATTATGAGGCT
GGTTCCTTTTCTGAGACAACAACACTTGACGGTAAAGTAATCTTCACTGTTGGTGCATTAAATGTTGAAGAAACAGGAGA
AACTGAAGGTACTTTAGCTACATACATGTGGCAGGGTAACCTCAATACAAGTTTTACAGGTGATGATAATCTTTATGTTA
GGTTGAAAACTGGTAATGCAACTGGTTGGCAAACTTCTTATACATATGGAACATATTTGTCTTCATCTAAAGGTAATGCC
GACGCTATAAAAGTTGACAAAATTTGGTACACATTCCCTGTTGGTGAAAAACACACAGTTTGGATTGGTCCAAAAATTGA
AAACTACTATATGCATGCGACTACTCCATCCATATACCAGCCTATAACTAAGCAATTTACACTAGGTGGTAACGGAGCAG
CTTACGGTGCAAGTACTAACCCTGGATTTGGTTGGGCTTACAAAGCTGATAACGGTTTTGCAATCAGTTCAAACGTTGTA
AGTAAAGAAGGCGATTCTACCAGTGGTTGGGGAACTAACGAATCTGCTACTAGTTGGGCTACTCAAATTGGATATACACA
GCCAACCTACTCTGCTTCTGTAATTCTTAACATGAAGTATAACGGCTGGACTGACTCATATTACACAACTCCATTTGGTA
AATTAAGACCAAACGGTGGTAATAGTTCAAACATCGGTTTGAGAGGCTGGTGGAGACCTGAAGATGCTGGTAAGGCGACC
CCTTCAATCTCTCTAGGTTATGACACCTCAGAAACAGATGCTACTACCAACTCTAATACTACGGCTTATTTCGTAGGTTT
AACATGGGAAGATACATTTACTCCTGATGATAAAATTGGAGTTGCTTTTGGTCAGCCTCAAACAAGAGAAGACGAAACAA
CTGTTGATCCTATAGCTTGGGAAGCTTATTATTCTTATCAAGTTAATGATTCTGTTAACGTTACTCCTGCAATATTCGGT
GGATCCGATAGAGCTGGTAGTGCCGGTAGACAGGGTAGAGATCATTTAGGTGCTGTTGTTGAAACAACCTTTAAGTTCTA
A

Upstream 100 bases:

>100_bases
ATTTGCTACATAGAAGTGAATCTATTAATCCTACTTAAAAATGTTACCCTCGATACAATTACTATACCCATTATTATGGG
CATTTTTCGTGTGAGGTAAA

Downstream 100 bases:

>100_bases
CTCAAAATTTAGAATGCCTTAAACGGTGTTTTATTTACTAAAACCGCTTTAATAAGCGGTTTTTTTTTTTTTAAGTTTAT
TTATATTTATCAATAATCAT

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKLFQKMLVATASVGLIAPMAAQASDVLNLEGMNDYNSSNKSSATSLFDSETFVNEVNEELATLKGRVDGIEAIQNDYEA
GSFSETTTLDGKVIFTVGALNVEETGETEGTLATYMWQGNLNTSFTGDDNLYVRLKTGNATGWQTSYTYGTYLSSSKGNA
DAIKVDKIWYTFPVGEKHTVWIGPKIENYYMHATTPSIYQPITKQFTLGGNGAAYGASTNPGFGWAYKADNGFAISSNVV
SKEGDSTSGWGTNESATSWATQIGYTQPTYSASVILNMKYNGWTDSYYTTPFGKLRPNGGNSSNIGLRGWWRPEDAGKAT
PSISLGYDTSETDATTNSNTTAYFVGLTWEDTFTPDDKIGVAFGQPQTREDETTVDPIAWEAYYSYQVNDSVNVTPAIFG
GSDRAGSAGRQGRDHLGAVVETTFKF

Sequences:

>Translated_426_residues
MKLFQKMLVATASVGLIAPMAAQASDVLNLEGMNDYNSSNKSSATSLFDSETFVNEVNEELATLKGRVDGIEAIQNDYEA
GSFSETTTLDGKVIFTVGALNVEETGETEGTLATYMWQGNLNTSFTGDDNLYVRLKTGNATGWQTSYTYGTYLSSSKGNA
DAIKVDKIWYTFPVGEKHTVWIGPKIENYYMHATTPSIYQPITKQFTLGGNGAAYGASTNPGFGWAYKADNGFAISSNVV
SKEGDSTSGWGTNESATSWATQIGYTQPTYSASVILNMKYNGWTDSYYTTPFGKLRPNGGNSSNIGLRGWWRPEDAGKAT
PSISLGYDTSETDATTNSNTTAYFVGLTWEDTFTPDDKIGVAFGQPQTREDETTVDPIAWEAYYSYQVNDSVNVTPAIFG
GSDRAGSAGRQGRDHLGAVVETTFKF
>Mature_426_residues
MKLFQKMLVATASVGLIAPMAAQASDVLNLEGMNDYNSSNKSSATSLFDSETFVNEVNEELATLKGRVDGIEAIQNDYEA
GSFSETTTLDGKVIFTVGALNVEETGETEGTLATYMWQGNLNTSFTGDDNLYVRLKTGNATGWQTSYTYGTYLSSSKGNA
DAIKVDKIWYTFPVGEKHTVWIGPKIENYYMHATTPSIYQPITKQFTLGGNGAAYGASTNPGFGWAYKADNGFAISSNVV
SKEGDSTSGWGTNESATSWATQIGYTQPTYSASVILNMKYNGWTDSYYTTPFGKLRPNGGNSSNIGLRGWWRPEDAGKAT
PSISLGYDTSETDATTNSNTTAYFVGLTWEDTFTPDDKIGVAFGQPQTREDETTVDPIAWEAYYSYQVNDSVNVTPAIFG
GSDRAGSAGRQGRDHLGAVVETTFKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 46138; Mature: 46138

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFQKMLVATASVGLIAPMAAQASDVLNLEGMNDYNSSNKSSATSLFDSETFVNEVNEE
CHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHH
LATLKGRVDGIEAIQNDYEAGSFSETTTLDGKVIFTVGALNVEETGETEGTLATYMWQGN
HHHHHCCCCHHHHHHCCCCCCCCCCCEECCCEEEEEEEEEECCCCCCCCCEEEEEEEECC
LNTSFTGDDNLYVRLKTGNATGWQTSYTYGTYLSSSKGNADAIKVDKIWYTFPVGEKHTV
CCCEEECCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCCCEEE
WIGPKIENYYMHATTPSIYQPITKQFTLGGNGAAYGASTNPGFGWAYKADNGFAISSNVV
EECCCCCEEEEEECCCHHHHCCHHEEEECCCCEECCCCCCCCCEEEEECCCCEEEECCCC
SKEGDSTSGWGTNESATSWATQIGYTQPTYSASVILNMKYNGWTDSYYTTPFGKLRPNGG
CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCCCC
NSSNIGLRGWWRPEDAGKATPSISLGYDTSETDATTNSNTTAYFVGLTWEDTFTPDDKIG
CCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEE
VAFGQPQTREDETTVDPIAWEAYYSYQVNDSVNVTPAIFGGSDRAGSAGRQGRDHLGAVV
EEECCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
ETTFKF
HHEECC
>Mature Secondary Structure
MKLFQKMLVATASVGLIAPMAAQASDVLNLEGMNDYNSSNKSSATSLFDSETFVNEVNEE
CHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHH
LATLKGRVDGIEAIQNDYEAGSFSETTTLDGKVIFTVGALNVEETGETEGTLATYMWQGN
HHHHHCCCCHHHHHHCCCCCCCCCCCEECCCEEEEEEEEEECCCCCCCCCEEEEEEEECC
LNTSFTGDDNLYVRLKTGNATGWQTSYTYGTYLSSSKGNADAIKVDKIWYTFPVGEKHTV
CCCEEECCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCCCEEE
WIGPKIENYYMHATTPSIYQPITKQFTLGGNGAAYGASTNPGFGWAYKADNGFAISSNVV
EECCCCCEEEEEECCCHHHHCCHHEEEECCCCEECCCCCCCCCEEEEECCCCEEEECCCC
SKEGDSTSGWGTNESATSWATQIGYTQPTYSASVILNMKYNGWTDSYYTTPFGKLRPNGG
CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCCCC
NSSNIGLRGWWRPEDAGKATPSISLGYDTSETDATTNSNTTAYFVGLTWEDTFTPDDKIG
CCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEE
VAFGQPQTREDETTVDPIAWEAYYSYQVNDSVNVTPAIFGGSDRAGSAGRQGRDHLGAVV
EEECCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
ETTFKF
HHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]