Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is bioH [C]

Identifier: 123966553

GI number: 123966553

Start: 1159318

End: 1160262

Strand: Direct

Name: bioH [C]

Synonym: P9515_13201

Alternate gene names: 123966553

Gene position: 1159318-1160262 (Clockwise)

Preceding gene: 123966548

Following gene: 123966554

Centisome position: 68.03

GC content: 29.84

Gene sequence:

>945_bases
ATGAACTCTACCTATTTATCAGAAGCAGGAGAAGAATCTAATTACTGGAATTGGAATGGATTCAAAATTTTTTGGAGTGT
TAAAGGGAAAGAAAATACACATCCTATGATTTTGCTTCACGGATTTGGCGCAAGCAGTAAACATTGGAGAAACAATTCTT
GCTACTTTGCAAAAAAAGGATATTCTGTTTACTCAATAGATTTAATTGGATTTGGAAATTCAGCTCAACCGGGGATAAGT
GAGATCGAAAAATTAGATAATGGAGTTTGGTGTAATCAGGTCAGTGATTTTATTAAACAAGTAATAAGACCACAGACTTC
TAAAAAGATTGTTTTAATAGGAAATTCTTTAGGATCTCTAGTAGCTTTGACATGTGCAGTCTATTTGAAAAATGAAATAC
TTTCTGTTGTGGCATCCCCTCTTCCGGATCCTTTATTAATCAGGAAAAAAGAGCCGAAAATTAATTTAATTTTTGAAAAA
TTCAAAACCAACCTTATAAAAATATTTTTTAAATTATTTCCTTTAGAAATATTTTTATTTTTAATAAATAAATTAGGAAT
AATAAAATTAGGGCTCAATGCTGCCTATTTTAAAAAGGATAACGTAGACAAAGAATTGATTGATATTGTAAGAAAGCCGG
TTTTAAGAAAGACTGCTGCCAGATCACTTAGAGCTATGTGTATAGGAATGTTAACAAGGGGAAATAAGTTAAAGGCAACT
TACCTTTTAGAACAACTAAGTTATACAAAAAAAGTTCCTTTTTTATTGTTGTGGGGAGAAAAAGATAATTTCATACCTTT
GTTTCTTGGTAAAAAGATTGCAAATTTCCATAGATGGGTAGAATTAAAAATAATACCTAATTCAGGCCATTGTGTTCATG
ATGAAGATCCTTCATTATTTAATAAAATTTCTCATGAATGGATTAGAGACTTAAAAACCTTTTAA

Upstream 100 bases:

>100_bases
CAATTATTATAATTTAACGTTTAATTGCATTTTTTTGTAAAAAAAATTACCAATGCAAATATCTTTAAATTATTTAAGAG
GGGAATAAAGGTTTATTTGT

Downstream 100 bases:

>100_bases
AATATGAAACATACATTATCAGTGCTTGTTGAAGACGAATCAGGAGCCTTGAGTAGAATCTCGGGACTTTTTGCTAGAAG
GGGTTTTAATATCGATAGTC

Product: putative alpha/beta hydrolase superfamily protein

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Hydrolase Fold; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Hydrolase Alpha/Beta Fold Domain-Containing Protein; Hydrolase; Dihydrolipoamide Acetyltransferase; Alpha/Beta Superfamily Hydrolase; Alpha/Beta Hydrolase Superfamily

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MNSTYLSEAGEESNYWNWNGFKIFWSVKGKENTHPMILLHGFGASSKHWRNNSCYFAKKGYSVYSIDLIGFGNSAQPGIS
EIEKLDNGVWCNQVSDFIKQVIRPQTSKKIVLIGNSLGSLVALTCAVYLKNEILSVVASPLPDPLLIRKKEPKINLIFEK
FKTNLIKIFFKLFPLEIFLFLINKLGIIKLGLNAAYFKKDNVDKELIDIVRKPVLRKTAARSLRAMCIGMLTRGNKLKAT
YLLEQLSYTKKVPFLLLWGEKDNFIPLFLGKKIANFHRWVELKIIPNSGHCVHDEDPSLFNKISHEWIRDLKTF

Sequences:

>Translated_314_residues
MNSTYLSEAGEESNYWNWNGFKIFWSVKGKENTHPMILLHGFGASSKHWRNNSCYFAKKGYSVYSIDLIGFGNSAQPGIS
EIEKLDNGVWCNQVSDFIKQVIRPQTSKKIVLIGNSLGSLVALTCAVYLKNEILSVVASPLPDPLLIRKKEPKINLIFEK
FKTNLIKIFFKLFPLEIFLFLINKLGIIKLGLNAAYFKKDNVDKELIDIVRKPVLRKTAARSLRAMCIGMLTRGNKLKAT
YLLEQLSYTKKVPFLLLWGEKDNFIPLFLGKKIANFHRWVELKIIPNSGHCVHDEDPSLFNKISHEWIRDLKTF
>Mature_314_residues
MNSTYLSEAGEESNYWNWNGFKIFWSVKGKENTHPMILLHGFGASSKHWRNNSCYFAKKGYSVYSIDLIGFGNSAQPGIS
EIEKLDNGVWCNQVSDFIKQVIRPQTSKKIVLIGNSLGSLVALTCAVYLKNEILSVVASPLPDPLLIRKKEPKINLIFEK
FKTNLIKIFFKLFPLEIFLFLINKLGIIKLGLNAAYFKKDNVDKELIDIVRKPVLRKTAARSLRAMCIGMLTRGNKLKAT
YLLEQLSYTKKVPFLLLWGEKDNFIPLFLGKKIANFHRWVELKIIPNSGHCVHDEDPSLFNKISHEWIRDLKTF

Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36001; Mature: 36001

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTYLSEAGEESNYWNWNGFKIFWSVKGKENTHPMILLHGFGASSKHWRNNSCYFAKKG
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEECC
YSVYSIDLIGFGNSAQPGISEIEKLDNGVWCNQVSDFIKQVIRPQTSKKIVLIGNSLGSL
CEEEEEEEEECCCCCCCCHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCHHHH
VALTCAVYLKNEILSVVASPLPDPLLIRKKEPKINLIFEKFKTNLIKIFFKLFPLEIFLF
HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LINKLGIIKLGLNAAYFKKDNVDKELIDIVRKPVLRKTAARSLRAMCIGMLTRGNKLKAT
HHHCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
YLLEQLSYTKKVPFLLLWGEKDNFIPLFLGKKIANFHRWVELKIIPNSGHCVHDEDPSLF
HHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHHEEEEEEEEECCCCCEECCCCHHHH
NKISHEWIRDLKTF
HHHHHHHHHHHHCC
>Mature Secondary Structure
MNSTYLSEAGEESNYWNWNGFKIFWSVKGKENTHPMILLHGFGASSKHWRNNSCYFAKKG
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEECC
YSVYSIDLIGFGNSAQPGISEIEKLDNGVWCNQVSDFIKQVIRPQTSKKIVLIGNSLGSL
CEEEEEEEEECCCCCCCCHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCHHHH
VALTCAVYLKNEILSVVASPLPDPLLIRKKEPKINLIFEKFKTNLIKIFFKLFPLEIFLF
HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LINKLGIIKLGLNAAYFKKDNVDKELIDIVRKPVLRKTAARSLRAMCIGMLTRGNKLKAT
HHHCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
YLLEQLSYTKKVPFLLLWGEKDNFIPLFLGKKIANFHRWVELKIIPNSGHCVHDEDPSLF
HHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHHEEEEEEEEECCCCCEECCCCHHHH
NKISHEWIRDLKTF
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA