| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is bioH [C]
Identifier: 123966553
GI number: 123966553
Start: 1159318
End: 1160262
Strand: Direct
Name: bioH [C]
Synonym: P9515_13201
Alternate gene names: 123966553
Gene position: 1159318-1160262 (Clockwise)
Preceding gene: 123966548
Following gene: 123966554
Centisome position: 68.03
GC content: 29.84
Gene sequence:
>945_bases ATGAACTCTACCTATTTATCAGAAGCAGGAGAAGAATCTAATTACTGGAATTGGAATGGATTCAAAATTTTTTGGAGTGT TAAAGGGAAAGAAAATACACATCCTATGATTTTGCTTCACGGATTTGGCGCAAGCAGTAAACATTGGAGAAACAATTCTT GCTACTTTGCAAAAAAAGGATATTCTGTTTACTCAATAGATTTAATTGGATTTGGAAATTCAGCTCAACCGGGGATAAGT GAGATCGAAAAATTAGATAATGGAGTTTGGTGTAATCAGGTCAGTGATTTTATTAAACAAGTAATAAGACCACAGACTTC TAAAAAGATTGTTTTAATAGGAAATTCTTTAGGATCTCTAGTAGCTTTGACATGTGCAGTCTATTTGAAAAATGAAATAC TTTCTGTTGTGGCATCCCCTCTTCCGGATCCTTTATTAATCAGGAAAAAAGAGCCGAAAATTAATTTAATTTTTGAAAAA TTCAAAACCAACCTTATAAAAATATTTTTTAAATTATTTCCTTTAGAAATATTTTTATTTTTAATAAATAAATTAGGAAT AATAAAATTAGGGCTCAATGCTGCCTATTTTAAAAAGGATAACGTAGACAAAGAATTGATTGATATTGTAAGAAAGCCGG TTTTAAGAAAGACTGCTGCCAGATCACTTAGAGCTATGTGTATAGGAATGTTAACAAGGGGAAATAAGTTAAAGGCAACT TACCTTTTAGAACAACTAAGTTATACAAAAAAAGTTCCTTTTTTATTGTTGTGGGGAGAAAAAGATAATTTCATACCTTT GTTTCTTGGTAAAAAGATTGCAAATTTCCATAGATGGGTAGAATTAAAAATAATACCTAATTCAGGCCATTGTGTTCATG ATGAAGATCCTTCATTATTTAATAAAATTTCTCATGAATGGATTAGAGACTTAAAAACCTTTTAA
Upstream 100 bases:
>100_bases CAATTATTATAATTTAACGTTTAATTGCATTTTTTTGTAAAAAAAATTACCAATGCAAATATCTTTAAATTATTTAAGAG GGGAATAAAGGTTTATTTGT
Downstream 100 bases:
>100_bases AATATGAAACATACATTATCAGTGCTTGTTGAAGACGAATCAGGAGCCTTGAGTAGAATCTCGGGACTTTTTGCTAGAAG GGGTTTTAATATCGATAGTC
Product: putative alpha/beta hydrolase superfamily protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Hydrolase Fold; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Hydrolase Alpha/Beta Fold Domain-Containing Protein; Hydrolase; Dihydrolipoamide Acetyltransferase; Alpha/Beta Superfamily Hydrolase; Alpha/Beta Hydrolase Superfamily
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MNSTYLSEAGEESNYWNWNGFKIFWSVKGKENTHPMILLHGFGASSKHWRNNSCYFAKKGYSVYSIDLIGFGNSAQPGIS EIEKLDNGVWCNQVSDFIKQVIRPQTSKKIVLIGNSLGSLVALTCAVYLKNEILSVVASPLPDPLLIRKKEPKINLIFEK FKTNLIKIFFKLFPLEIFLFLINKLGIIKLGLNAAYFKKDNVDKELIDIVRKPVLRKTAARSLRAMCIGMLTRGNKLKAT YLLEQLSYTKKVPFLLLWGEKDNFIPLFLGKKIANFHRWVELKIIPNSGHCVHDEDPSLFNKISHEWIRDLKTF
Sequences:
>Translated_314_residues MNSTYLSEAGEESNYWNWNGFKIFWSVKGKENTHPMILLHGFGASSKHWRNNSCYFAKKGYSVYSIDLIGFGNSAQPGIS EIEKLDNGVWCNQVSDFIKQVIRPQTSKKIVLIGNSLGSLVALTCAVYLKNEILSVVASPLPDPLLIRKKEPKINLIFEK FKTNLIKIFFKLFPLEIFLFLINKLGIIKLGLNAAYFKKDNVDKELIDIVRKPVLRKTAARSLRAMCIGMLTRGNKLKAT YLLEQLSYTKKVPFLLLWGEKDNFIPLFLGKKIANFHRWVELKIIPNSGHCVHDEDPSLFNKISHEWIRDLKTF >Mature_314_residues MNSTYLSEAGEESNYWNWNGFKIFWSVKGKENTHPMILLHGFGASSKHWRNNSCYFAKKGYSVYSIDLIGFGNSAQPGIS EIEKLDNGVWCNQVSDFIKQVIRPQTSKKIVLIGNSLGSLVALTCAVYLKNEILSVVASPLPDPLLIRKKEPKINLIFEK FKTNLIKIFFKLFPLEIFLFLINKLGIIKLGLNAAYFKKDNVDKELIDIVRKPVLRKTAARSLRAMCIGMLTRGNKLKAT YLLEQLSYTKKVPFLLLWGEKDNFIPLFLGKKIANFHRWVELKIIPNSGHCVHDEDPSLFNKISHEWIRDLKTF
Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36001; Mature: 36001
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTYLSEAGEESNYWNWNGFKIFWSVKGKENTHPMILLHGFGASSKHWRNNSCYFAKKG CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEECC YSVYSIDLIGFGNSAQPGISEIEKLDNGVWCNQVSDFIKQVIRPQTSKKIVLIGNSLGSL CEEEEEEEEECCCCCCCCHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCHHHH VALTCAVYLKNEILSVVASPLPDPLLIRKKEPKINLIFEKFKTNLIKIFFKLFPLEIFLF HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LINKLGIIKLGLNAAYFKKDNVDKELIDIVRKPVLRKTAARSLRAMCIGMLTRGNKLKAT HHHCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH YLLEQLSYTKKVPFLLLWGEKDNFIPLFLGKKIANFHRWVELKIIPNSGHCVHDEDPSLF HHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHHEEEEEEEEECCCCCEECCCCHHHH NKISHEWIRDLKTF HHHHHHHHHHHHCC >Mature Secondary Structure MNSTYLSEAGEESNYWNWNGFKIFWSVKGKENTHPMILLHGFGASSKHWRNNSCYFAKKG CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEECC YSVYSIDLIGFGNSAQPGISEIEKLDNGVWCNQVSDFIKQVIRPQTSKKIVLIGNSLGSL CEEEEEEEEECCCCCCCCHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCHHHH VALTCAVYLKNEILSVVASPLPDPLLIRKKEPKINLIFEKFKTNLIKIFFKLFPLEIFLF HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LINKLGIIKLGLNAAYFKKDNVDKELIDIVRKPVLRKTAARSLRAMCIGMLTRGNKLKAT HHHCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH YLLEQLSYTKKVPFLLLWGEKDNFIPLFLGKKIANFHRWVELKIIPNSGHCVHDEDPSLF HHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHHEEEEEEEEECCCCCEECCCCHHHH NKISHEWIRDLKTF HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA