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The map label for this gene is ycbC [H]

Identifier: 123966515

GI number: 123966515

Start: 1125908

End: 1126618

Strand: Direct

Name: ycbC [H]

Synonym: P9515_12821

Alternate gene names: 123966515

Gene position: 1125908-1126618 (Clockwise)

Preceding gene: 123966513

Following gene: 123966516

Centisome position: 66.07

GC content: 30.94

Gene sequence:

>711_bases
GTGTTAATACTTTTGGTTATTTTTATTATTAGAAAAAAATTAAGATTTATTTATTCCGCGCTTATTATTTTATTAGTCTT
TAGCAATGGGGTTTTTTCTGAATGCTTATGGCGATTGCTAGAGTATCCATGGAAAAGATTAGAATTTTCCTCCATTAATT
CTGCAGATGGTATTGTTGTCTTAAGTGGGGGCAGGCATTTACCACTAGGTAATACCAAAATAATTGAATGGCATGATCCA
GACAGGTTTCTAGCTGGTATAGAACTTTATAAAGCTAATAAATCAAATAAATTGATATTTACTGGAGGAGTAAGTCTACT
AACTTCAAATTTACCTCCTGAGGGAACTATCTATATCAAGGAAGCAATATCAATGGGTATTCCTAAAAAAGACGTTTTAA
CTACATATCCTGTTTACAATACCCTAGAAGAAGCTGAAGCAGTTAAGGCATTACTATACAGAGAAAAACCCTTAAGTAAA
AAAAAGATAATCTTAGTTACTAGTGCATTCCATATGAAAAGAGCAAAAAAAGTTTTTGAGAGAGAAGGAATGAATGTTTT
ACCTTATCCTGTAGATTTTAAAAGTAGTAGAAATTTCATCTCGTCATTAACTAATATATTTAAGTGGATTCCAAGCTCTT
CTAATCTATATAAAAGCTCAATGGCAGTTAGAGAAATTATTGGGAGAATGATATATAATTCTTGGAGATAG

Upstream 100 bases:

>100_bases
TTCTTTAAGCTTTTTTGAATTAGAATATTTAAAGATAATAAATTTAGATACGTATTTACTAAGTAAGTTACTGCCTTTAA
TTTTTTCTCCATTAGGTATT

Downstream 100 bases:

>100_bases
AAGTTAGATTAAGACTTTATTTAAATAGCAGAGATATTTCTTTTAATGCATTTTATATTATTTCCTAATAACATTTAACT
TTATAAAAACCTAAATAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MLILLVIFIIRKKLRFIYSALIILLVFSNGVFSECLWRLLEYPWKRLEFSSINSADGIVVLSGGRHLPLGNTKIIEWHDP
DRFLAGIELYKANKSNKLIFTGGVSLLTSNLPPEGTIYIKEAISMGIPKKDVLTTYPVYNTLEEAEAVKALLYREKPLSK
KKIILVTSAFHMKRAKKVFEREGMNVLPYPVDFKSSRNFISSLTNIFKWIPSSSNLYKSSMAVREIIGRMIYNSWR

Sequences:

>Translated_236_residues
MLILLVIFIIRKKLRFIYSALIILLVFSNGVFSECLWRLLEYPWKRLEFSSINSADGIVVLSGGRHLPLGNTKIIEWHDP
DRFLAGIELYKANKSNKLIFTGGVSLLTSNLPPEGTIYIKEAISMGIPKKDVLTTYPVYNTLEEAEAVKALLYREKPLSK
KKIILVTSAFHMKRAKKVFEREGMNVLPYPVDFKSSRNFISSLTNIFKWIPSSSNLYKSSMAVREIIGRMIYNSWR
>Mature_236_residues
MLILLVIFIIRKKLRFIYSALIILLVFSNGVFSECLWRLLEYPWKRLEFSSINSADGIVVLSGGRHLPLGNTKIIEWHDP
DRFLAGIELYKANKSNKLIFTGGVSLLTSNLPPEGTIYIKEAISMGIPKKDVLTTYPVYNTLEEAEAVKALLYREKPLSK
KKIILVTSAFHMKRAKKVFEREGMNVLPYPVDFKSSRNFISSLTNIFKWIPSSSNLYKSSMAVREIIGRMIYNSWR

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=180, Percent_Identity=34.4444444444444, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 27069; Mature: 27069

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILLVIFIIRKKLRFIYSALIILLVFSNGVFSECLWRLLEYPWKRLEFSSINSADGIVV
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCEEE
LSGGRHLPLGNTKIIEWHDPDRFLAGIELYKANKSNKLIFTGGVSLLTSNLPPEGTIYIK
EECCCCCCCCCCEEEEECCCHHHHHHHHEEECCCCCEEEEECCHHHHHCCCCCCCEEEEE
EAISMGIPKKDVLTTYPVYNTLEEAEAVKALLYREKPLSKKKIILVTSAFHMKRAKKVFE
HHHHCCCCCHHHEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHH
REGMNVLPYPVDFKSSRNFISSLTNIFKWIPSSSNLYKSSMAVREIIGRMIYNSWR
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLILLVIFIIRKKLRFIYSALIILLVFSNGVFSECLWRLLEYPWKRLEFSSINSADGIVV
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCEEE
LSGGRHLPLGNTKIIEWHDPDRFLAGIELYKANKSNKLIFTGGVSLLTSNLPPEGTIYIK
EECCCCCCCCCCEEEEECCCHHHHHHHHEEECCCCCEEEEECCHHHHHCCCCCCCEEEEE
EAISMGIPKKDVLTTYPVYNTLEEAEAVKALLYREKPLSKKKIILVTSAFHMKRAKKVFE
HHHHCCCCCHHHEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHH
REGMNVLPYPVDFKSSRNFISSLTNIFKWIPSSSNLYKSSMAVREIIGRMIYNSWR
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]