| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966514
Identifier: 123966514
GI number: 123966514
Start: 1124959
End: 1125471
Strand: Reverse
Name: 123966514
Synonym: P9515_12811
Alternate gene names: NA
Gene position: 1125471-1124959 (Counterclockwise)
Preceding gene: 123966519
Following gene: 123966508
Centisome position: 66.04
GC content: 23.98
Gene sequence:
>513_bases ATGAGAATAAATAAAGGTTATTGGCTATGGGGACTATTCCCTTCTAAAGAGACTAATATTTTAAATGAAATAAAAGTTAA AGTTCAAAGTAAATTAAAAAGCCCATTTTTTGAAACTCATATAACTCTTGCAGGACCTTATTTGAGTATTGATAAACCTT TTTTAAATAAATTAAAAACTTTTGGCGAAAGTAATTCCGTAATTATGTTGAATGTAGAAGGTTACGATTTTAAACAAAAA AAGTATGAATCATTTTATATTTCAATAAAAAAATCTAGACCTCTAAATGAAATTAGAAAAAATATCTACGAACTAAACAA ATTTGATGTGGGAAATAACTATTCTCCTCATATTAGTTTGTCTTATGGAAATCATGAAATAAAAGAAAAGAAAATATTAA TTTCAAAATTACCTAAATTTAATAAACCAATCAAAATGTCAAAAATAGCTTTAGTTCAAGTAGATGAGGATATACATCTT TGGAAGATTTTAGAAAGTTTTGATTTGAATTAA
Upstream 100 bases:
>100_bases TTCTATGTTTTTCTTAGGTGGTTTTATACTAAATTTTAAGTTCTTATTTCAAAAAATATACCTTTTCACTTTTCTACCCT TAATTATCTAAATTAATAAA
Downstream 100 bases:
>100_bases AATAATTCAAATTAAAGAGGTGATATTTTTATTTTTTATTTCTGATTTCTACCAAATTTAAATGAGTTAATCGCTAAAAA GAAAATCTTTGTTCCTAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRINKGYWLWGLFPSKETNILNEIKVKVQSKLKSPFFETHITLAGPYLSIDKPFLNKLKTFGESNSVIMLNVEGYDFKQK KYESFYISIKKSRPLNEIRKNIYELNKFDVGNNYSPHISLSYGNHEIKEKKILISKLPKFNKPIKMSKIALVQVDEDIHL WKILESFDLN
Sequences:
>Translated_170_residues MRINKGYWLWGLFPSKETNILNEIKVKVQSKLKSPFFETHITLAGPYLSIDKPFLNKLKTFGESNSVIMLNVEGYDFKQK KYESFYISIKKSRPLNEIRKNIYELNKFDVGNNYSPHISLSYGNHEIKEKKILISKLPKFNKPIKMSKIALVQVDEDIHL WKILESFDLN >Mature_170_residues MRINKGYWLWGLFPSKETNILNEIKVKVQSKLKSPFFETHITLAGPYLSIDKPFLNKLKTFGESNSVIMLNVEGYDFKQK KYESFYISIKKSRPLNEIRKNIYELNKFDVGNNYSPHISLSYGNHEIKEKKILISKLPKFNKPIKMSKIALVQVDEDIHL WKILESFDLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19988; Mature: 19988
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRINKGYWLWGLFPSKETNILNEIKVKVQSKLKSPFFETHITLAGPYLSIDKPFLNKLKT CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHEEEEEEECCEEECCHHHHHHHHH FGESNSVIMLNVEGYDFKQKKYESFYISIKKSRPLNEIRKNIYELNKFDVGNNYSPHISL CCCCCCEEEEEECCCCCCHHCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEE SYGNHEIKEKKILISKLPKFNKPIKMSKIALVQVDEDIHLWKILESFDLN EECCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCC >Mature Secondary Structure MRINKGYWLWGLFPSKETNILNEIKVKVQSKLKSPFFETHITLAGPYLSIDKPFLNKLKT CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHEEEEEEECCEEECCHHHHHHHHH FGESNSVIMLNVEGYDFKQKKYESFYISIKKSRPLNEIRKNIYELNKFDVGNNYSPHISL CCCCCCEEEEEECCCCCCHHCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEE SYGNHEIKEKKILISKLPKFNKPIKMSKIALVQVDEDIHLWKILESFDLN EECCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA