Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966486

Identifier: 123966486

GI number: 123966486

Start: 1101612

End: 1102043

Strand: Reverse

Name: 123966486

Synonym: P9515_12531

Alternate gene names: NA

Gene position: 1102043-1101612 (Counterclockwise)

Preceding gene: 123966488

Following gene: 123966485

Centisome position: 64.67

GC content: 29.17

Gene sequence:

>432_bases
ATGGACTTAAGAAAATTCTATTCTTTAAATTTTCTTGGTAAATTATTGCTAAGCGCAATTTTTGTAAATGCAATACCCGG
AAAAATTACAAATTTTGGTAGTCAAGTTAATTACATAGCTAGCAGAGGATTCCCCGAATCATTTTCAATAGTTATGTTAA
TTGGAGCAATAGTTCTTTTGATAAGCGGTACAGTTCTTTTGATCTTTTCAGAAAAAACTAAACTTGCTTGTACGCTGCTT
CTTATTTTTTTAGTCCCTACTACAATTATTTTTCACTTAGTACCATTTCAATTAATGGCGATTACTCGAAATCTATCATT
AATTGGAGGATTATTAGTGGCGATAGATAAATCTAAGATTAATTACTTAAATCCATCTTCAAACCTAGAAACAAAAGAAA
TTGAGTATTCTGATTTGAATGAAGATAATTAG

Upstream 100 bases:

>100_bases
TTTTTAATTTTAAGGCAGTTTCTTAATTATTTAGAAAAGTCAAATAACTTGAAAATAAAAAGAAAGAACGTTATTTATGT
ATTAACCGAAACTTTTTTTT

Downstream 100 bases:

>100_bases
ATAGGCTTGAATATCTCATCAAAAGACATTATAAATGGATTTAACAAAGCAGGGCATACAAAAAAGTCTTGGGCCGGGAA
TCTTATTAGCTGGAGCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MDLRKFYSLNFLGKLLLSAIFVNAIPGKITNFGSQVNYIASRGFPESFSIVMLIGAIVLLISGTVLLIFSEKTKLACTLL
LIFLVPTTIIFHLVPFQLMAITRNLSLIGGLLVAIDKSKINYLNPSSNLETKEIEYSDLNEDN

Sequences:

>Translated_143_residues
MDLRKFYSLNFLGKLLLSAIFVNAIPGKITNFGSQVNYIASRGFPESFSIVMLIGAIVLLISGTVLLIFSEKTKLACTLL
LIFLVPTTIIFHLVPFQLMAITRNLSLIGGLLVAIDKSKINYLNPSSNLETKEIEYSDLNEDN
>Mature_143_residues
MDLRKFYSLNFLGKLLLSAIFVNAIPGKITNFGSQVNYIASRGFPESFSIVMLIGAIVLLISGTVLLIFSEKTKLACTLL
LIFLVPTTIIFHLVPFQLMAITRNLSLIGGLLVAIDKSKINYLNPSSNLETKEIEYSDLNEDN

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15829; Mature: 15829

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRKFYSLNFLGKLLLSAIFVNAIPGKITNFGSQVNYIASRGFPESFSIVMLIGAIVLL
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
ISGTVLLIFSEKTKLACTLLLIFLVPTTIIFHLVPFQLMAITRNLSLIGGLLVAIDKSKI
HCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
NYLNPSSNLETKEIEYSDLNEDN
CEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLRKFYSLNFLGKLLLSAIFVNAIPGKITNFGSQVNYIASRGFPESFSIVMLIGAIVLL
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
ISGTVLLIFSEKTKLACTLLLIFLVPTTIIFHLVPFQLMAITRNLSLIGGLLVAIDKSKI
HCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
NYLNPSSNLETKEIEYSDLNEDN
CEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA