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The map label for this gene is ydhD [C]

Identifier: 123966435

GI number: 123966435

Start: 1061075

End: 1061398

Strand: Direct

Name: ydhD [C]

Synonym: P9515_12021

Alternate gene names: 123966435

Gene position: 1061075-1061398 (Clockwise)

Preceding gene: 123966434

Following gene: 123966437

Centisome position: 62.26

GC content: 31.48

Gene sequence:

>324_bases
ATGGAAAACCTTACTAAAAATAAAATCCAAAAACTTATCGACTCTAGTCCTGTTATGGTCTTCATGAAAGGAACTAAATT
AATGCCTCAATGTGGATTTTCAAATAATGTAGTTCAAATTCTTAATTCACTGGGAGTAGAATTCGATACTTTTGATGTCT
TGAGTGATTTTGAGATAAGAGAGGGCATAAAAGAGTATTCTGAATGGCCGACAATTCCTCAAGTGTATCTAAAAGGAGAA
TTCTTAGGAGGTTCAGATATTCTTATTGAAATGTACAATTCAGGAACTTTAAAAGAAAAGATTGAAATCGAATTAGCATC
TTAA

Upstream 100 bases:

>100_bases
AGTTAAACAACACCAATTAGTTTATTCTGCCCTAAAAGAAGAATTAGCTTCAGAAGCTATTCATGCTTTAGCACTAAAAA
CGGAAATCCCCAATTAAATT

Downstream 100 bases:

>100_bases
AATATTTACTAAGTATAAATACCGTAATTAAGTTAATAAAAATTAATATTTTAAAACTTTTTTTTATCAAAAAACCCCTT
GTTTTCCTCACCATCTGGAT

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MENLTKNKIQKLIDSSPVMVFMKGTKLMPQCGFSNNVVQILNSLGVEFDTFDVLSDFEIREGIKEYSEWPTIPQVYLKGE
FLGGSDILIEMYNSGTLKEKIEIELAS

Sequences:

>Translated_107_residues
MENLTKNKIQKLIDSSPVMVFMKGTKLMPQCGFSNNVVQILNSLGVEFDTFDVLSDFEIREGIKEYSEWPTIPQVYLKGE
FLGGSDILIEMYNSGTLKEKIEIELAS
>Mature_107_residues
MENLTKNKIQKLIDSSPVMVFMKGTKLMPQCGFSNNVVQILNSLGVEFDTFDVLSDFEIREGIKEYSEWPTIPQVYLKGE
FLGGSDILIEMYNSGTLKEKIEIELAS

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=96, Percent_Identity=54.1666666666667, Blast_Score=114, Evalue=2e-26,
Organism=Homo sapiens, GI95113651, Length=90, Percent_Identity=51.1111111111111, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787943, Length=98, Percent_Identity=42.8571428571429, Blast_Score=99, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17556042, Length=95, Percent_Identity=50.5263157894737, Blast_Score=108, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI71988159, Length=86, Percent_Identity=47.6744186046512, Blast_Score=100, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71988153, Length=86, Percent_Identity=47.6744186046512, Blast_Score=100, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6325198, Length=100, Percent_Identity=48, Blast_Score=106, Evalue=7e-25,
Organism=Saccharomyces cerevisiae, GI6320303, Length=83, Percent_Identity=49.3975903614458, Blast_Score=97, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6321022, Length=83, Percent_Identity=46.9879518072289, Blast_Score=94, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24642023, Length=97, Percent_Identity=50.5154639175258, Blast_Score=117, Evalue=1e-27,
Organism=Drosophila melanogaster, GI19921242, Length=95, Percent_Identity=44.2105263157895, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 12114; Mature: 12114

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENLTKNKIQKLIDSSPVMVFMKGTKLMPQCGFSNNVVQILNSLGVEFDTFDVLSDFEIR
CCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHCCCHHH
EGIKEYSEWPTIPQVYLKGEFLGGSDILIEMYNSGTLKEKIEIELAS
HHHHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEEEECC
>Mature Secondary Structure
MENLTKNKIQKLIDSSPVMVFMKGTKLMPQCGFSNNVVQILNSLGVEFDTFDVLSDFEIR
CCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHCCCHHH
EGIKEYSEWPTIPQVYLKGEFLGGSDILIEMYNSGTLKEKIEIELAS
HHHHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]