| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is pkwA [H]
Identifier: 123966361
GI number: 123966361
Start: 983771
End: 984844
Strand: Direct
Name: pkwA [H]
Synonym: P9515_11281
Alternate gene names: 123966361
Gene position: 983771-984844 (Clockwise)
Preceding gene: 123966360
Following gene: 123966363
Centisome position: 57.73
GC content: 40.88
Gene sequence:
>1074_bases GTGCCTGATATAGAACCGTTTAACCCTAGAGGGATGTTTCATGAGGGCTGGTCTGCTGAAGTTGAAGATTATGCAATAGT TTGTGGTTGGGCTTTAGGAGGAAAACTTTTTATTGTCGGAGATGTAGCCGGAGGAGTTTACGGGTTCGAGGGGGATACAG GTAAAATTGTTTGGGAAAAGAATGAAGCCCATTCAGGAGGTCTTCTTGCAATGTCTATTCATCCAAATGGAAATATTTTT GCGACTTCAGGACAAGATGGAATAGTTCGAATATGTAATTGTAATAATGGTGAGAAAATTAAGGACATTAAACTTGGCAA ATGTTGGGTAGAGCATCTAAGTTGGTCAAATGATGGCTCATTTTTAGCTGCAGCCTTTTCCAAAAAAGTGTATGTACTTA ATCAGGAGGGTAATGAAAATTGGGTTTCAGAGGAACATCCAAGCACAGTAAGTGCAATATCATGGTCAAATAAAAATGAA TTAGCAACTGCCTGTTATGGTCAAGTAACTTTCTTTGATGTAGCTAATAATAAAACCAATCAAAAACTTAAATGGCAAGG ATCCTTGGTGTCGATGAAGTTAAGCCCCGATGGAGATATTGTTGCATGCGGAAGTCAAGATAATTCTGTACACTTCTGGC GAAGATCAACTGGACAAGATGCTGAAATGACCGGTTATCCAGCAAAGCCTTCTCACCTCTCTTTTGATGAAACAGGCATG CTATTAGCAACTAGTGGAAGCGAAAGAATTACTGTATGGAGTTTTTCAGGGAATGGCCCTCAAGGTACGATCCCGGGAGA ATTATGTCATCATACAGAACCAGTTTCTAGCCTAGCTTTTTCTAACAAAGGTTTGCTAGTTGCTTCAGGATCAAGAGATG GTTCAGTCGTAGCTAGTTTTCTTAAAAAAGACGGGAATGGGGATCCTGTTGGAGCTGCTTTTGCCGGTGATTTAGTTGGA GATATTGCGTGGAGACCCGATGACTGCGCTTTAGCCGCAGTTAATGCAAAGGGTGTTGTAACAGTTTGGAATTTCAAAGT CCGTACGACTTCCATTTCAAAGGGGTTCAAGTAA
Upstream 100 bases:
>100_bases CTCAGCCAGATAAAGAATGGGGTAATGAACCTCGTAGAAATCAACTTGTATTTATTGGCAGAAATCTTAATGAAAAAGAG ATGCAGGAGGGATTTGATAA
Downstream 100 bases:
>100_bases TTACAAGCTAATAGCTTTACCAATAATTAGCTTTTAAATGTCTCTCCATACAAATCACTTCGCAATCATTATCAATACCT TTTGGATGAATATCGCAATA
Product: WD-40 repeat-containing G-protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MPDIEPFNPRGMFHEGWSAEVEDYAIVCGWALGGKLFIVGDVAGGVYGFEGDTGKIVWEKNEAHSGGLLAMSIHPNGNIF ATSGQDGIVRICNCNNGEKIKDIKLGKCWVEHLSWSNDGSFLAAAFSKKVYVLNQEGNENWVSEEHPSTVSAISWSNKNE LATACYGQVTFFDVANNKTNQKLKWQGSLVSMKLSPDGDIVACGSQDNSVHFWRRSTGQDAEMTGYPAKPSHLSFDETGM LLATSGSERITVWSFSGNGPQGTIPGELCHHTEPVSSLAFSNKGLLVASGSRDGSVVASFLKKDGNGDPVGAAFAGDLVG DIAWRPDDCALAAVNAKGVVTVWNFKVRTTSISKGFK
Sequences:
>Translated_357_residues MPDIEPFNPRGMFHEGWSAEVEDYAIVCGWALGGKLFIVGDVAGGVYGFEGDTGKIVWEKNEAHSGGLLAMSIHPNGNIF ATSGQDGIVRICNCNNGEKIKDIKLGKCWVEHLSWSNDGSFLAAAFSKKVYVLNQEGNENWVSEEHPSTVSAISWSNKNE LATACYGQVTFFDVANNKTNQKLKWQGSLVSMKLSPDGDIVACGSQDNSVHFWRRSTGQDAEMTGYPAKPSHLSFDETGM LLATSGSERITVWSFSGNGPQGTIPGELCHHTEPVSSLAFSNKGLLVASGSRDGSVVASFLKKDGNGDPVGAAFAGDLVG DIAWRPDDCALAAVNAKGVVTVWNFKVRTTSISKGFK >Mature_356_residues PDIEPFNPRGMFHEGWSAEVEDYAIVCGWALGGKLFIVGDVAGGVYGFEGDTGKIVWEKNEAHSGGLLAMSIHPNGNIFA TSGQDGIVRICNCNNGEKIKDIKLGKCWVEHLSWSNDGSFLAAAFSKKVYVLNQEGNENWVSEEHPSTVSAISWSNKNEL ATACYGQVTFFDVANNKTNQKLKWQGSLVSMKLSPDGDIVACGSQDNSVHFWRRSTGQDAEMTGYPAKPSHLSFDETGML LATSGSERITVWSFSGNGPQGTIPGELCHHTEPVSSLAFSNKGLLVASGSRDGSVVASFLKKDGNGDPVGAAFAGDLVGD IAWRPDDCALAAVNAKGVVTVWNFKVRTTSISKGFK
Specific function: May play a regulatory role during the complex growth cycle and in secondary metabolite production [H]
COG id: COG2319
COG function: function code R; FOG: WD40 repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 7 WD repeats [H]
Homologues:
Organism=Homo sapiens, GI113865883, Length=269, Percent_Identity=24.5353159851301, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020472 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 - InterPro: IPR008271 - InterPro: IPR015943 - InterPro: IPR001680 - InterPro: IPR011046 - InterPro: IPR019782 - InterPro: IPR019775 - InterPro: IPR017986 - InterPro: IPR019781 [H]
Pfam domain/function: PF00069 Pkinase; PF00400 WD40 [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 38250; Mature: 38119
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS50082 WD_REPEATS_2 ; PS50294 WD_REPEATS_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDIEPFNPRGMFHEGWSAEVEDYAIVCGWALGGKLFIVGDVAGGVYGFEGDTGKIVWEK CCCCCCCCCCCCEECCCCCCCCCEEEEEEEECCCEEEEEEECCCCEEEEECCCCEEEEEC NEAHSGGLLAMSIHPNGNIFATSGQDGIVRICNCNNGEKIKDIKLGKCWVEHLSWSNDGS CCCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCCEEEEEEHHHHHHHHCCCCCCCC FLAAAFSKKVYVLNQEGNENWVSEEHPSTVSAISWSNKNELATACYGQVTFFDVANNKTN EEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECEEEEEEECCCCCC QKLKWQGSLVSMKLSPDGDIVACGSQDNSVHFWRRSTGQDAEMTGYPAKPSHLSFDETGM CEEEEECEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCE LLATSGSERITVWSFSGNGPQGTIPGELCHHTEPVSSLAFSNKGLLVASGSRDGSVVASF EEEECCCCEEEEEEECCCCCCCCCCHHHHCCCCCHHHHHCCCCCEEEEECCCCHHHHHHH LKKDGNGDPVGAAFAGDLVGDIAWRPDDCALAAVNAKGVVTVWNFKVRTTSISKGFK HHCCCCCCCCCCEEHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCCCC >Mature Secondary Structure PDIEPFNPRGMFHEGWSAEVEDYAIVCGWALGGKLFIVGDVAGGVYGFEGDTGKIVWEK CCCCCCCCCCCEECCCCCCCCCEEEEEEEECCCEEEEEEECCCCEEEEECCCCEEEEEC NEAHSGGLLAMSIHPNGNIFATSGQDGIVRICNCNNGEKIKDIKLGKCWVEHLSWSNDGS CCCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCCEEEEEEHHHHHHHHCCCCCCCC FLAAAFSKKVYVLNQEGNENWVSEEHPSTVSAISWSNKNELATACYGQVTFFDVANNKTN EEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECEEEEEEECCCCCC QKLKWQGSLVSMKLSPDGDIVACGSQDNSVHFWRRSTGQDAEMTGYPAKPSHLSFDETGM CEEEEECEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCE LLATSGSERITVWSFSGNGPQGTIPGELCHHTEPVSSLAFSNKGLLVASGSRDGSVVASF EEEECCCCEEEEEEECCCCCCCCCCHHHHCCCCCHHHHHCCCCCEEEEECCCCHHHHHHH LKKDGNGDPVGAAFAGDLVGDIAWRPDDCALAAVNAKGVVTVWNFKVRTTSISKGFK HHCCCCCCCCCCEEHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8631732 [H]