| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966335
Identifier: 123966335
GI number: 123966335
Start: 968539
End: 968952
Strand: Reverse
Name: 123966335
Synonym: P9515_11021
Alternate gene names: NA
Gene position: 968952-968539 (Counterclockwise)
Preceding gene: 123966339
Following gene: 123966329
Centisome position: 56.86
GC content: 34.06
Gene sequence:
>414_bases ATGCCAATAGTTTTTGCTTGGAGCCTTTGTCTATCTGTTTTGGTAGTTTTATTATCAACAATTCCTTTAACAATCGGAAG AGTTAAGGCGGGTTATTCAATGGAGAATATGTCTGCGCCAAGAGCATTATTTGATGAACTGCCAGACTTTGGGAAAAGAG CTGTATGGTGTCATCAGAATTGTTGGGAAAGTATTTCTATTCATGCTCCAGCTTGCATACTGTGTTTAATTACTTTACCT AATTCAAATATCTCATTAATAGCAGCTTGGATACACCCTCTTTTACGTTTATTTTATATAGGGGCTTATGTTTTTAATGT TCCTATTGCTAGGGGATTATTGTGGGCTTCTGGACTTTTTACGACAATAGTTTTATATAAAGAAGGTTTAACAAAGATTA TGTTAATTAACTAA
Upstream 100 bases:
>100_bases TGAATACAAATTATTATTTAAAATTCTTAAAATTATATATTAAATTTTATTCCGCGATAATCAGAAGTAATTACTAAGCT AAGATAAACATTTAATTTAT
Downstream 100 bases:
>100_bases ATTAAAAAATTTCCTAACTCTTTTAATTCAAATTCATTTATTAATTTGACTTTGTTAGCTCGAGCAAGCTTTTGTGCAGA TTTAGTAAAACCAGATTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MPIVFAWSLCLSVLVVLLSTIPLTIGRVKAGYSMENMSAPRALFDELPDFGKRAVWCHQNCWESISIHAPACILCLITLP NSNISLIAAWIHPLLRLFYIGAYVFNVPIARGLLWASGLFTTIVLYKEGLTKIMLIN
Sequences:
>Translated_137_residues MPIVFAWSLCLSVLVVLLSTIPLTIGRVKAGYSMENMSAPRALFDELPDFGKRAVWCHQNCWESISIHAPACILCLITLP NSNISLIAAWIHPLLRLFYIGAYVFNVPIARGLLWASGLFTTIVLYKEGLTKIMLIN >Mature_136_residues PIVFAWSLCLSVLVVLLSTIPLTIGRVKAGYSMENMSAPRALFDELPDFGKRAVWCHQNCWESISIHAPACILCLITLPN SNISLIAAWIHPLLRLFYIGAYVFNVPIARGLLWASGLFTTIVLYKEGLTKIMLIN
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15263; Mature: 15131
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVFAWSLCLSVLVVLLSTIPLTIGRVKAGYSMENMSAPRALFDELPDFGKRAVWCHQN CCEEHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHCHHHCCCEEHHHHH CWESISIHAPACILCLITLPNSNISLIAAWIHPLLRLFYIGAYVFNVPIARGLLWASGLF HHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTIVLYKEGLTKIMLIN HHHHHHHCCCCEEEEEC >Mature Secondary Structure PIVFAWSLCLSVLVVLLSTIPLTIGRVKAGYSMENMSAPRALFDELPDFGKRAVWCHQN CEEHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHCHHHCCCEEHHHHH CWESISIHAPACILCLITLPNSNISLIAAWIHPLLRLFYIGAYVFNVPIARGLLWASGLF HHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTIVLYKEGLTKIMLIN HHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA