| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966304
Identifier: 123966304
GI number: 123966304
Start: 951158
End: 951562
Strand: Direct
Name: 123966304
Synonym: P9515_10711
Alternate gene names: NA
Gene position: 951158-951562 (Clockwise)
Preceding gene: 123966301
Following gene: 123966306
Centisome position: 55.81
GC content: 28.89
Gene sequence:
>405_bases ATGGCAAGTCAAGATTATCTAATCGCAATTGCATTAATAGAGCAAAATGATCTAAGAGCTATGCCTTTAGGTGGAAAAGA AATCAAAGTAAATCTTGAAGAAAAAGGTAATCTGAATAAACTTGGAGAAGAAGTAATTTTAAATCTTCTTCTAAGAGTAT TTCAAAGAAGTGATGAAGGAGCATTAAGAAGAGTTTCAGAAGATAAAGGTTTATTATTAGTTCATATGCATCCAAAAAGG ATGCAAAAAGAATTGCCGTTTATTAAATCTGAATGGATAAGAGATGGAGATACAAATCAATTTTTAAAATACTTAGGTAA TCTTTCCAAAGAAATTTGGACAGCTTCCTTCATAAAATATAAAGGTATTGAATTAGTATCAATAGCAAAAAACGATGAAA TCTAA
Upstream 100 bases:
>100_bases ATTATAAAATTAATTTAAATCAACATTTAGAGAACTTGATAAATAAAATTTATCTTGAGGTCTAGGGGTTAGAATAATCC ATACAAAATTACAAAAGAAT
Downstream 100 bases:
>100_bases TATTTTTTGTAAGTTAATTACCTAAAGTATTTTCCTAATTAATTTATCATTTTTTTTAAAGATTTTAAGACAATTCTTAT TCTCTCCAAAATTAATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MASQDYLIAIALIEQNDLRAMPLGGKEIKVNLEEKGNLNKLGEEVILNLLLRVFQRSDEGALRRVSEDKGLLLVHMHPKR MQKELPFIKSEWIRDGDTNQFLKYLGNLSKEIWTASFIKYKGIELVSIAKNDEI
Sequences:
>Translated_134_residues MASQDYLIAIALIEQNDLRAMPLGGKEIKVNLEEKGNLNKLGEEVILNLLLRVFQRSDEGALRRVSEDKGLLLVHMHPKR MQKELPFIKSEWIRDGDTNQFLKYLGNLSKEIWTASFIKYKGIELVSIAKNDEI >Mature_133_residues ASQDYLIAIALIEQNDLRAMPLGGKEIKVNLEEKGNLNKLGEEVILNLLLRVFQRSDEGALRRVSEDKGLLLVHMHPKRM QKELPFIKSEWIRDGDTNQFLKYLGNLSKEIWTASFIKYKGIELVSIAKNDEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15395; Mature: 15264
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQDYLIAIALIEQNDLRAMPLGGKEIKVNLEEKGNLNKLGEEVILNLLLRVFQRSDEG CCCCCEEEEEEEEECCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCH ALRRVSEDKGLLLVHMHPKRMQKELPFIKSEWIRDGDTNQFLKYLGNLSKEIWTASFIKY HHHHHCCCCCEEEEEECHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC KGIELVSIAKNDEI CCEEEEEECCCCCC >Mature Secondary Structure ASQDYLIAIALIEQNDLRAMPLGGKEIKVNLEEKGNLNKLGEEVILNLLLRVFQRSDEG CCCCEEEEEEEEECCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCH ALRRVSEDKGLLLVHMHPKRMQKELPFIKSEWIRDGDTNQFLKYLGNLSKEIWTASFIKY HHHHHCCCCCEEEEEECHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC KGIELVSIAKNDEI CCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA