| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966295
Identifier: 123966295
GI number: 123966295
Start: 945507
End: 946010
Strand: Direct
Name: 123966295
Synonym: P9515_10621
Alternate gene names: NA
Gene position: 945507-946010 (Clockwise)
Preceding gene: 123966294
Following gene: 123966296
Centisome position: 55.48
GC content: 29.56
Gene sequence:
>504_bases TTGCAAAATAAATATTTATTTCTGATTTTAGCTAGTGGAGTTGTAAATGATCAGGGTTTTTGGCTAATTGGAGTCAAAAA TAGTGACTCAATAATACTTGATGATAAATCACTCTTAGAATGCCACAGGAAAGAGCTTATCGGTGTTGAGTCCGCAAAGG ATATTCTTAATGCAATAAATTTAAATTTAGATAATCTAATGAGCGATTTAAAAAAAAAAAAAATACCCTTAGACGCACCT CCAAAAGGAATTTCCTTTAACATTCCATTAAACACACTAGAAAATATATTTGATTTTTGGTTAGACAAATATAAGGATAA GCAAGCATGGGAAACTTGTTTTGGACTTCTAAAAATCAGAAGAAGAGTATCATTAACAAATTTAATAAATAGCGAAAGCA TAAAAGGAGATTCAAAAAAATGGGCTTTAGAGATTGAGGAGCTTCACACTTATAAGCCAAATTTAATAAAAAACGATAAC TCAATTGATCCAATGTGGAAATAA
Upstream 100 bases:
>100_bases TTTTTCAAATCCGTGAGTGTATATTTAATGTGAATTAATCGCAAAGCTATTTTATTTATTGTCCTTTAATGCTAAAACTT AATAGTGAGGAATTTTTATT
Downstream 100 bases:
>100_bases ATTTATCTTTTTTGAATAAAAATGTTTACTTATTTAAAATTTAAGTAAGTATAAAAATATATATATAAATAAAAATATGA ATAAAACATATTCATTTAAT
Product: josephin
Products: NA
Alternate protein names: Josephin-Like
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MQNKYLFLILASGVVNDQGFWLIGVKNSDSIILDDKSLLECHRKELIGVESAKDILNAINLNLDNLMSDLKKKKIPLDAP PKGISFNIPLNTLENIFDFWLDKYKDKQAWETCFGLLKIRRRVSLTNLINSESIKGDSKKWALEIEELHTYKPNLIKNDN SIDPMWK
Sequences:
>Translated_167_residues MQNKYLFLILASGVVNDQGFWLIGVKNSDSIILDDKSLLECHRKELIGVESAKDILNAINLNLDNLMSDLKKKKIPLDAP PKGISFNIPLNTLENIFDFWLDKYKDKQAWETCFGLLKIRRRVSLTNLINSESIKGDSKKWALEIEELHTYKPNLIKNDN SIDPMWK >Mature_167_residues MQNKYLFLILASGVVNDQGFWLIGVKNSDSIILDDKSLLECHRKELIGVESAKDILNAINLNLDNLMSDLKKKKIPLDAP PKGISFNIPLNTLENIFDFWLDKYKDKQAWETCFGLLKIRRRVSLTNLINSESIKGDSKKWALEIEELHTYKPNLIKNDN SIDPMWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19247; Mature: 19247
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNKYLFLILASGVVNDQGFWLIGVKNSDSIILDDKSLLECHRKELIGVESAKDILNAIN CCCCEEEEEEECCEECCCCEEEEEECCCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHC LNLDNLMSDLKKKKIPLDAPPKGISFNIPLNTLENIFDFWLDKYKDKQAWETCFGLLKIR CCHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RRVSLTNLINSESIKGDSKKWALEIEELHTYKPNLIKNDNSIDPMWK HHHHHHHHHCCCCCCCCCCHHEEEHHHHHCCCCCEECCCCCCCCCCC >Mature Secondary Structure MQNKYLFLILASGVVNDQGFWLIGVKNSDSIILDDKSLLECHRKELIGVESAKDILNAIN CCCCEEEEEEECCEECCCCEEEEEECCCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHC LNLDNLMSDLKKKKIPLDAPPKGISFNIPLNTLENIFDFWLDKYKDKQAWETCFGLLKIR CCHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RRVSLTNLINSESIKGDSKKWALEIEELHTYKPNLIKNDNSIDPMWK HHHHHHHHHCCCCCCCCCCHHEEEHHHHHCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA