| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966260
Identifier: 123966260
GI number: 123966260
Start: 917595
End: 918041
Strand: Direct
Name: 123966260
Synonym: P9515_10271
Alternate gene names: NA
Gene position: 917595-918041 (Clockwise)
Preceding gene: 123966259
Following gene: 123966270
Centisome position: 53.84
GC content: 32.89
Gene sequence:
>447_bases ATGAAAAAAAAACAATCTAAAAAGAAAAACTTTACAAAAAAGAAAAAGATAGTTGAGAGTGATGCCTTTAGAAGTATAGA AAAAAAGGTCCCAACAATAACCTCCAATACTAAAAAATCAACTGGAATACCAAAATATGTAGCTGACAGGATGGCAAGAA GAATCTTTTTTACTGCAGGAATACCAACAATCATGGGTATGTCCGTATTTGTTGTAAGTTATATAATTGTCACAAGAAAT ATTGCTGAAATACCTCCTTCTTCAACGATAGCAATATCGGCATTATTCTTCTTACTAGGACTAGGGGGGCTAAGTTTTGG CATATTATCTGCAAGTTGGGATAAAGAACCGGGAAGTTTTTTTGGTATAGAAAATATTCCCTTGAATATTGAAAGAGCGA AGGCTGCTTTTAAACCAGCATCTCAAAATTTTGATAAGAAACAGTAA
Upstream 100 bases:
>100_bases AGGTAAAAGGAAAAGGTTGCTATCATATATAAAAGGTAAAGATCCCAAAAACTATCAAGACCTTATTAAAAAAATTGGAA TCAGAGGATGAATTCCTTTA
Downstream 100 bases:
>100_bases ATTAGGCAATCAACGATTTTAAATTTACTTGGAAAGATTTATCAGAGAGTAATTTCGTAACACCCACAATATCTCCTACG CAAAACTGATCTCCAAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKKKQSKKKNFTKKKKIVESDAFRSIEKKVPTITSNTKKSTGIPKYVADRMARRIFFTAGIPTIMGMSVFVVSYIIVTRN IAEIPPSSTIAISALFFLLGLGGLSFGILSASWDKEPGSFFGIENIPLNIERAKAAFKPASQNFDKKQ
Sequences:
>Translated_148_residues MKKKQSKKKNFTKKKKIVESDAFRSIEKKVPTITSNTKKSTGIPKYVADRMARRIFFTAGIPTIMGMSVFVVSYIIVTRN IAEIPPSSTIAISALFFLLGLGGLSFGILSASWDKEPGSFFGIENIPLNIERAKAAFKPASQNFDKKQ >Mature_148_residues MKKKQSKKKNFTKKKKIVESDAFRSIEKKVPTITSNTKKSTGIPKYVADRMARRIFFTAGIPTIMGMSVFVVSYIIVTRN IAEIPPSSTIAISALFFLLGLGGLSFGILSASWDKEPGSFFGIENIPLNIERAKAAFKPASQNFDKKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16396; Mature: 16396
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKQSKKKNFTKKKKIVESDAFRSIEKKVPTITSNTKKSTGIPKYVADRMARRIFFTAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC IPTIMGMSVFVVSYIIVTRNIAEIPPSSTIAISALFFLLGLGGLSFGILSASWDKEPGSF CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE FGIENIPLNIERAKAAFKPASQNFDKKQ ECCCCCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKKKQSKKKNFTKKKKIVESDAFRSIEKKVPTITSNTKKSTGIPKYVADRMARRIFFTAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC IPTIMGMSVFVVSYIIVTRNIAEIPPSSTIAISALFFLLGLGGLSFGILSASWDKEPGSF CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE FGIENIPLNIERAKAAFKPASQNFDKKQ ECCCCCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA