| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is ubiE [C]
Identifier: 123966237
GI number: 123966237
Start: 899150
End: 900205
Strand: Direct
Name: ubiE [C]
Synonym: P9515_10041
Alternate gene names: 123966237
Gene position: 899150-900205 (Clockwise)
Preceding gene: 123966236
Following gene: 123966238
Centisome position: 52.76
GC content: 30.21
Gene sequence:
>1056_bases ATGTCAAGAGAACCAATTTCAAAAATCGCTTATAAAACACTTCAACAGGGAAAAAGTATTGCTGGACTAGCTCATAAGGA ATTAAGTACAAGGATCATGAATTTTATTCTTCCTGACAATAAATTTGGCAATTTAGATATAGATAAAAAGCTCTTGGTTG ATATTCAAAATTCAATGGATCGTCTCAGAGAAGAGGATTGGGATGATGCTGAAAAAAATATTTATCCTCAAAAATTACTA TTTGATGAACCTTGGCTAAGATATTTGACCCAATATCCAAAAATTTGGTTAGATATGCCAAACACATGGGACAGAAGAAG AAAACAAAATTATAATGATCTTCCTAAAAATATTGATAATGAGAACTACCCAAAATATTATTTAAGAAACTTTCATCATC AGACAGACGGATATTTATCAGATTTTTCAGCAAGTATTTATGATTTGCAAGTAGAAATTCTTTTTAACGGAAGTGCCGAT GCTATGAGGAGAAGAATAATTAAACCACTTAAGGAAGGTTTAAATAATTTTAGCAGTCGAAAAAAAAGTTCTTTAAACAT ACTAGATGTTGCTACAGGTTCCGGTAGAACACTTAAACAGTTGAGAGGGGCATTTCCTAAAGAAAAGATAATGGGATTAG ATTTGTCTGGATCCTACTTAAAGGAAGCCAGCAGATTTATTTCAAATTTAGATGGTGATTTAATTGAATTAATTAAAGGT AACGCTGAAGAATTACCATTCGAAGAAAATACCCTCCAAGGAATTACATGTGTTTATTTATTTCATGAATTACCTAGAAC TGTAAGAGAGAATGTCTTAAAAGAATTTTTTAGAGTACTTGAACCGGGTGGCAGTTTAATACTGGCTGATTCGATACAAG TAAGTGATTCTCCTGATTTTATAAAGATAATGGAAAATTTCTATAAATCATTTCATGAACCATTTTATTGTGATTACATC AAAGAAGACATAACTACTAAAATAAAAGAAATTGGTTTTAACAATGTAAAATCAAATTCTTTTTTCATGACTAAAGTATG GTCTGCTATAAAATAG
Upstream 100 bases:
>100_bases AAACATTTAAGCATTTTTTAAAATGTCATTTTGAGAATTATCACAAATAATTCTCAAATTGATTTTTTTTTTGTTGAAAT ATAGTTAAGTAGTAAAAAAA
Downstream 100 bases:
>100_bases AGAGATAATATAAAATTGCCATGAATAACTGGGACGAAGATATTATAGAACTTGCACAAAAATTGAATTCTAAACTAAAA ATTAATCATATTGATTGGCA
Product: methyltransferase
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: Methyltransferase; Methyltransferase Domain Family; UbiE/COQ5 Family Methlytransferase; Methyltransferase UbiE/COQ5 Family Protein; SAM-Dependent Methyltransferase; Methyltransferase UbiE; Generic Methyl-Transferase; UbiE/COQ5 Methyltransferase; Methyltransferase UbiE/COQ5 Family; Methlytransferase; Ubiquinone/Menaquinone Biosynthesis Protein
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSREPISKIAYKTLQQGKSIAGLAHKELSTRIMNFILPDNKFGNLDIDKKLLVDIQNSMDRLREEDWDDAEKNIYPQKLL FDEPWLRYLTQYPKIWLDMPNTWDRRRKQNYNDLPKNIDNENYPKYYLRNFHHQTDGYLSDFSASIYDLQVEILFNGSAD AMRRRIIKPLKEGLNNFSSRKKSSLNILDVATGSGRTLKQLRGAFPKEKIMGLDLSGSYLKEASRFISNLDGDLIELIKG NAEELPFEENTLQGITCVYLFHELPRTVRENVLKEFFRVLEPGGSLILADSIQVSDSPDFIKIMENFYKSFHEPFYCDYI KEDITTKIKEIGFNNVKSNSFFMTKVWSAIK
Sequences:
>Translated_351_residues MSREPISKIAYKTLQQGKSIAGLAHKELSTRIMNFILPDNKFGNLDIDKKLLVDIQNSMDRLREEDWDDAEKNIYPQKLL FDEPWLRYLTQYPKIWLDMPNTWDRRRKQNYNDLPKNIDNENYPKYYLRNFHHQTDGYLSDFSASIYDLQVEILFNGSAD AMRRRIIKPLKEGLNNFSSRKKSSLNILDVATGSGRTLKQLRGAFPKEKIMGLDLSGSYLKEASRFISNLDGDLIELIKG NAEELPFEENTLQGITCVYLFHELPRTVRENVLKEFFRVLEPGGSLILADSIQVSDSPDFIKIMENFYKSFHEPFYCDYI KEDITTKIKEIGFNNVKSNSFFMTKVWSAIK >Mature_350_residues SREPISKIAYKTLQQGKSIAGLAHKELSTRIMNFILPDNKFGNLDIDKKLLVDIQNSMDRLREEDWDDAEKNIYPQKLLF DEPWLRYLTQYPKIWLDMPNTWDRRRKQNYNDLPKNIDNENYPKYYLRNFHHQTDGYLSDFSASIYDLQVEILFNGSADA MRRRIIKPLKEGLNNFSSRKKSSLNILDVATGSGRTLKQLRGAFPKEKIMGLDLSGSYLKEASRFISNLDGDLIELIKGN AEELPFEENTLQGITCVYLFHELPRTVRENVLKEFFRVLEPGGSLILADSIQVSDSPDFIKIMENFYKSFHEPFYCDYIK EDITTKIKEIGFNNVKSNSFFMTKVWSAIK
Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.- [C]
Molecular weight: Translated: 40964; Mature: 40833
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSREPISKIAYKTLQQGKSIAGLAHKELSTRIMNFILPDNKFGNLDIDKKLLVDIQNSMD CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH RLREEDWDDAEKNIYPQKLLFDEPWLRYLTQYPKIWLDMPNTWDRRRKQNYNDLPKNIDN HHHHCCCCCHHHCCCCHHHHCCCHHHHHHHHCCEEEEECCCHHHHHHHCCCCCCCCCCCC ENYPKYYLRNFHHQTDGYLSDFSASIYDLQVEILFNGSADAMRRRIIKPLKEGLNNFSSR CCCCHHHHHHHCCCCCCHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH KKSSLNILDVATGSGRTLKQLRGAFPKEKIMGLDLSGSYLKEASRFISNLDGDLIELIKG HHCCCCEEEECCCCCHHHHHHHCCCCHHHHEECCCCHHHHHHHHHHHHHCCHHHHHHHCC NAEELPFEENTLQGITCVYLFHELPRTVRENVLKEFFRVLEPGGSLILADSIQVSDSPDF CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEECCCCCHH IKIMENFYKSFHEPFYCDYIKEDITTKIKEIGFNNVKSNSFFMTKVWSAIK HHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure SREPISKIAYKTLQQGKSIAGLAHKELSTRIMNFILPDNKFGNLDIDKKLLVDIQNSMD CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH RLREEDWDDAEKNIYPQKLLFDEPWLRYLTQYPKIWLDMPNTWDRRRKQNYNDLPKNIDN HHHHCCCCCHHHCCCCHHHHCCCHHHHHHHHCCEEEEECCCHHHHHHHCCCCCCCCCCCC ENYPKYYLRNFHHQTDGYLSDFSASIYDLQVEILFNGSADAMRRRIIKPLKEGLNNFSSR CCCCHHHHHHHCCCCCCHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH KKSSLNILDVATGSGRTLKQLRGAFPKEKIMGLDLSGSYLKEASRFISNLDGDLIELIKG HHCCCCEEEECCCCCHHHHHHHCCCCHHHHEECCCCHHHHHHHHHHHHHCCHHHHHHHCC NAEELPFEENTLQGITCVYLFHELPRTVRENVLKEFFRVLEPGGSLILADSIQVSDSPDF CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEECCCCCHH IKIMENFYKSFHEPFYCDYIKEDITTKIKEIGFNNVKSNSFFMTKVWSAIK HHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA