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The map label for this gene is 123966225

Identifier: 123966225

GI number: 123966225

Start: 887436

End: 887918

Strand: Direct

Name: 123966225

Synonym: P9515_09921

Alternate gene names: NA

Gene position: 887436-887918 (Clockwise)

Preceding gene: 123966224

Following gene: 123966226

Centisome position: 52.07

GC content: 26.92

Gene sequence:

>483_bases
TTGGTTACCAGAGTTGAGGCTGTTCTTTATCTTAAAGGGAGGCCTATATCAAAAAAGAATCTTTCAGAAATTACTAATAC
AGATATAAATTCAATTGACAATGCATTAAAAGAATTAAAAGAAAAATATTCAAACTCAAAATCAGCAATTGAATTAAATG
AAGTTAATAATACGTTTTGTCTAGAATTAAAATCAACACTCAATGAATATGTAGAAGATTTATTACCATCAGAATTAAGG
ACATCAGAATTAAGGACATTGGCAACAATTGCAATTAAGAAAAAAATATTGCAATCAGATCTAATAGTTTTAAGAGGATC
AGGCGCTTATGAACATATAAAGGAATTAATAAATAAAAAATTCATTATTAAACGTAAACAAAAAGATGGAAGATCGTATT
GGTTATCATTATCTGAAAAGTTTTTTCAAACTTTTGCTGTCAGCAATGAATATTTATCGCAAATAGGCGGCAATAAAAAG
TAA

Upstream 100 bases:

>100_bases
CTTGGTGCATCAGAATAAATATAAGGTAACTTGGGTAAGAGTTAGGTAGAAAAAAATTAATCAAGCTGATCTTATTACTA
CAAAATCACCAGACATAGAC

Downstream 100 bases:

>100_bases
ATGTTAGAATAATTAAAACACTGTAAAATAATGTTATCTGAGATTTTTGCTGTATTAGGTCAAACTTTATCAATTTATTC
ATTTATTTTGATTATTAGAA

Product: transcription regulator

Products: NA

Alternate protein names: Segregation And Condensation Protein B; Condensin Subunit ScpB; Transcriptional Regulator; Transcription Regulator; YpuH-Like Family Transcriptional Regulator; Chromosome Segregation/Condensation Protein B; Transcription Regulator YpuH-Like Family

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MVTRVEAVLYLKGRPISKKNLSEITNTDINSIDNALKELKEKYSNSKSAIELNEVNNTFCLELKSTLNEYVEDLLPSELR
TSELRTLATIAIKKKILQSDLIVLRGSGAYEHIKELINKKFIIKRKQKDGRSYWLSLSEKFFQTFAVSNEYLSQIGGNKK

Sequences:

>Translated_160_residues
MVTRVEAVLYLKGRPISKKNLSEITNTDINSIDNALKELKEKYSNSKSAIELNEVNNTFCLELKSTLNEYVEDLLPSELR
TSELRTLATIAIKKKILQSDLIVLRGSGAYEHIKELINKKFIIKRKQKDGRSYWLSLSEKFFQTFAVSNEYLSQIGGNKK
>Mature_160_residues
MVTRVEAVLYLKGRPISKKNLSEITNTDINSIDNALKELKEKYSNSKSAIELNEVNNTFCLELKSTLNEYVEDLLPSELR
TSELRTLATIAIKKKILQSDLIVLRGSGAYEHIKELINKKFIIKRKQKDGRSYWLSLSEKFFQTFAVSNEYLSQIGGNKK

Specific function: Unknown

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18333; Mature: 18333

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTRVEAVLYLKGRPISKKNLSEITNTDINSIDNALKELKEKYSNSKSAIELNEVNNTFC
CCCHHEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHH
LELKSTLNEYVEDLLPSELRTSELRTLATIAIKKKILQSDLIVLRGSGAYEHIKELINKK
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHH
FIIKRKQKDGRSYWLSLSEKFFQTFAVSNEYLSQIGGNKK
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVTRVEAVLYLKGRPISKKNLSEITNTDINSIDNALKELKEKYSNSKSAIELNEVNNTFC
CCCHHEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHH
LELKSTLNEYVEDLLPSELRTSELRTLATIAIKKKILQSDLIVLRGSGAYEHIKELINKK
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHH
FIIKRKQKDGRSYWLSLSEKFFQTFAVSNEYLSQIGGNKK
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA