| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966201
Identifier: 123966201
GI number: 123966201
Start: 862725
End: 863372
Strand: Reverse
Name: 123966201
Synonym: P9515_09681
Alternate gene names: NA
Gene position: 863372-862725 (Counterclockwise)
Preceding gene: 123966202
Following gene: 123966200
Centisome position: 50.66
GC content: 26.08
Gene sequence:
>648_bases ATGACTAATAGCTATATACTTCCAAAGGATCTTAATGATGCCTTAAAAAATATGGAAAGTGCAATAATTTCTAGTTTAAA AAATTCAAATAGTAGATTCACAGTTGAATTTAATTTTGAGGGATTAAGGTTTAATAAGATAGGTATAAATATTTATAAGA TCCTTGCAAATTATTTTAATAATAAAAAAATAAAAAAAAGTGTTTTTGTTACTTACTCTGATCCGGGAGCTGTAGCTTTA GCCCAGAGAGATTATCCGGATATAAAAGAAAATATTTTTACATTTAATGGTTTTAATGAATCTATTTATATTGATCAAGA TGACTCAATAGTCATTTCTATACTTCCACAACCTTACGATTTTGGTTTATTTGAACCAATGTGCGAAAACTTTAAAGGAT TGCATTATTCATTAAATCCAAAATTTGAGGATGCAAATATAGGTATAGGTAGCGTAATACGAGAAAGAAGAAAAAACTTT GTAAAAACATGGCAAAATATATACTTTCTTCAACCGATTAATAATGGTGCTCTAATGCATTCTTATCCCAATAATTGGTT ACTTTTTAAAGAAATTAACAACAAATATTTATTTAAAAAAGAATTTGAGGAGAAACCAGACAATGAAACAATTTTTGTAA ATTTATAG
Upstream 100 bases:
>100_bases AACTTTATTCAAATATTCGTGTTAGTTTAGGATCTATGAATAAAAAATCTGATTTAGATAGACTGTTTGAATTAATTCAA AATTGTATAAAAAAATTCTA
Downstream 100 bases:
>100_bases ATTCTAAGTGATAAGAAAATTTTACTTTTTAATTGTTGTTATATCTTCTTTATTAAGTTTTCCATTTATATTAAGGTATC TAATAATTACAAAAAAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MTNSYILPKDLNDALKNMESAIISSLKNSNSRFTVEFNFEGLRFNKIGINIYKILANYFNNKKIKKSVFVTYSDPGAVAL AQRDYPDIKENIFTFNGFNESIYIDQDDSIVISILPQPYDFGLFEPMCENFKGLHYSLNPKFEDANIGIGSVIRERRKNF VKTWQNIYFLQPINNGALMHSYPNNWLLFKEINNKYLFKKEFEEKPDNETIFVNL
Sequences:
>Translated_215_residues MTNSYILPKDLNDALKNMESAIISSLKNSNSRFTVEFNFEGLRFNKIGINIYKILANYFNNKKIKKSVFVTYSDPGAVAL AQRDYPDIKENIFTFNGFNESIYIDQDDSIVISILPQPYDFGLFEPMCENFKGLHYSLNPKFEDANIGIGSVIRERRKNF VKTWQNIYFLQPINNGALMHSYPNNWLLFKEINNKYLFKKEFEEKPDNETIFVNL >Mature_214_residues TNSYILPKDLNDALKNMESAIISSLKNSNSRFTVEFNFEGLRFNKIGINIYKILANYFNNKKIKKSVFVTYSDPGAVALA QRDYPDIKENIFTFNGFNESIYIDQDDSIVISILPQPYDFGLFEPMCENFKGLHYSLNPKFEDANIGIGSVIRERRKNFV KTWQNIYFLQPINNGALMHSYPNNWLLFKEINNKYLFKKEFEEKPDNETIFVNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25137; Mature: 25006
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSYILPKDLNDALKNMESAIISSLKNSNSRFTVEFNFEGLRFNKIGINIYKILANYFN CCCCEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECHHHHHHHHHHHC NKKIKKSVFVTYSDPGAVALAQRDYPDIKENIFTFNGFNESIYIDQDDSIVISILPQPYD CCEEEEEEEEEECCCCEEEEECCCCCCHHHCEEEEECCCCEEEEECCCCEEEEECCCCCC FGLFEPMCENFKGLHYSLNPKFEDANIGIGSVIRERRKNFVKTWQNIYFLQPINNGALMH CCCHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEE SYPNNWLLFKEINNKYLFKKEFEEKPDNETIFVNL ECCCCEEEEEECCCCEEEEEHHHCCCCCCEEEEEC >Mature Secondary Structure TNSYILPKDLNDALKNMESAIISSLKNSNSRFTVEFNFEGLRFNKIGINIYKILANYFN CCCEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECHHHHHHHHHHHC NKKIKKSVFVTYSDPGAVALAQRDYPDIKENIFTFNGFNESIYIDQDDSIVISILPQPYD CCEEEEEEEEEECCCCEEEEECCCCCCHHHCEEEEECCCCEEEEECCCCEEEEECCCCCC FGLFEPMCENFKGLHYSLNPKFEDANIGIGSVIRERRKNFVKTWQNIYFLQPINNGALMH CCCHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEE SYPNNWLLFKEINNKYLFKKEFEEKPDNETIFVNL ECCCCEEEEEECCCCEEEEEHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA