| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966190
Identifier: 123966190
GI number: 123966190
Start: 848192
End: 848578
Strand: Reverse
Name: 123966190
Synonym: P9515_09571
Alternate gene names: NA
Gene position: 848578-848192 (Counterclockwise)
Preceding gene: 123966192
Following gene: 123966189
Centisome position: 49.79
GC content: 32.3
Gene sequence:
>387_bases ATGGATAAACAAATAAATAATGAACATTTAAATGTCTTAGGTCAGAAGCTTGAAGTATGCAGCTGTAACCCTTTAACAGG TTGGTTCCGTGATGGATTTTGCAAATATGATTTAAATGATGGAGGAAATCATTCAATTTGCTGTGTTATGGATGATAATT TTCTTAAATATAGTAAGTCTCAGGGTAACGATCTGATAACACCTATGCCTGCGTATTCCTTCCCAGGTCTTAAGGAGGGA GATCATTGGTGTATTTGTTTAGATAGGTGGAGACAAGCTTTACTTGATGGCTTAGCACCAATGGTTATATTGGAGTCAAC AAATATTATAGTTTTAGAATTTGTTTCATTAGAAAAACTAAAAGAATATCAATTTAATAAAAAGTAA
Upstream 100 bases:
>100_bases TTATTAAAATAAATAACTCTTCACCCCCCATATTCGTCAACCCTTTTTTAAGAAATGTACGAGTATTTATTATTATTTAA CTAAATTCACAATTAATGAA
Downstream 100 bases:
>100_bases TTCTAAATTTATTATATTTTTTAAAATAAGCATGGGAATTTATCTGTATATTCGAAATGAGATGTGAAAAATACTGGAAA AAAGCCTTAGATCAAACACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MDKQINNEHLNVLGQKLEVCSCNPLTGWFRDGFCKYDLNDGGNHSICCVMDDNFLKYSKSQGNDLITPMPAYSFPGLKEG DHWCICLDRWRQALLDGLAPMVILESTNIIVLEFVSLEKLKEYQFNKK
Sequences:
>Translated_128_residues MDKQINNEHLNVLGQKLEVCSCNPLTGWFRDGFCKYDLNDGGNHSICCVMDDNFLKYSKSQGNDLITPMPAYSFPGLKEG DHWCICLDRWRQALLDGLAPMVILESTNIIVLEFVSLEKLKEYQFNKK >Mature_128_residues MDKQINNEHLNVLGQKLEVCSCNPLTGWFRDGFCKYDLNDGGNHSICCVMDDNFLKYSKSQGNDLITPMPAYSFPGLKEG DHWCICLDRWRQALLDGLAPMVILESTNIIVLEFVSLEKLKEYQFNKK
Specific function: Unknown
COG id: COG3651
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14680; Mature: 14680
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKQINNEHLNVLGQKLEVCSCNPLTGWFRDGFCKYDLNDGGNHSICCVMDDNFLKYSKS CCCCCCCHHHHHHHHHCCEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEECCC QGNDLITPMPAYSFPGLKEGDHWCICLDRWRQALLDGLAPMVILESTNIIVLEFVSLEKL CCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEECCCEEEEEECCHHHH KEYQFNKK HHHCCCCC >Mature Secondary Structure MDKQINNEHLNVLGQKLEVCSCNPLTGWFRDGFCKYDLNDGGNHSICCVMDDNFLKYSKS CCCCCCCHHHHHHHHHCCEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEECCC QGNDLITPMPAYSFPGLKEGDHWCICLDRWRQALLDGLAPMVILESTNIIVLEFVSLEKL CCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEECCCEEEEEECCHHHH KEYQFNKK HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA