| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966165
Identifier: 123966165
GI number: 123966165
Start: 832874
End: 833632
Strand: Direct
Name: 123966165
Synonym: P9515_09321
Alternate gene names: NA
Gene position: 832874-833632 (Clockwise)
Preceding gene: 123966164
Following gene: 123966167
Centisome position: 48.87
GC content: 16.73
Gene sequence:
>759_bases TTGATAATAAAATTAAACCTATTAAGAATTTTTATAATTTCATTATTAGTTATAATTTTTCCATTAATTCAAAATCAATG GTTAAATTTATATCTATTTGATAAAAATAGTTTTACGATTTATAAGACATTATATTTTTTAAGTGGATTATTGATTCCAG TTCTTGTAAGCATTACTTCATTAAAAAATTTTACATTTTATAAATTTAGTAATTACAAAATTAAGAAAAATAAAGAAATT ACCGGTAAATTATTATTTATAATCGTAGTGACAGCTTTATTTATATTCTCTTCACTTTTTTTGACTTATCTTTTTATTAA TTTTAAAATATTTTTTAACATAGTTATCTCTAATAATAATTATTTATTGGATTTTAACTTTAATAAATACATTATATCTG TTGTAATTATTTCTATATTATTAATATTTAGAAAATTAAAATTAATTATAAAAAAAATTATACTTATAAATTTTCTTATG ATTTCATCTATGATTTGGTATGCAAAATTAAACAATATATTATTTAACGATACATTCTTGGTTAAAAATCATTTAACCTT TGATAATGTAAATTCTATAAATTTACTTTTATTGTTATCACTTGAAATATCATATTACTTATGGTCATATCTTTCACAAG CGAATTATTTAACAGATTGGAGTATTCCAGCTCAACCAAATAATTTACTCATTTCATTTGTTAAAATTATATTTTTTTAT TTAATGGTTATTTTATATTATTTTATAATTTCAAATTAG
Upstream 100 bases:
>100_bases ATCAATAAAGAAACTATAGATAATAATACTTTTAAAAAAATAACTCATAATTTGTTAAAAGTATGATTTAAATCCTAAAT TTATTTATAAATTATTTATT
Downstream 100 bases:
>100_bases ATAAAATTTATATCTAAAATATATAATTATATCTAGAGTGCAGAAAAGTATTCTTTACTTCCTTTTGGATCTTCTAACAT TGTTTTTTCTCCTGGAGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MIIKLNLLRIFIISLLVIIFPLIQNQWLNLYLFDKNSFTIYKTLYFLSGLLIPVLVSITSLKNFTFYKFSNYKIKKNKEI TGKLLFIIVVTALFIFSSLFLTYLFINFKIFFNIVISNNNYLLDFNFNKYIISVVIISILLIFRKLKLIIKKIILINFLM ISSMIWYAKLNNILFNDTFLVKNHLTFDNVNSINLLLLLSLEISYYLWSYLSQANYLTDWSIPAQPNNLLISFVKIIFFY LMVILYYFIISN
Sequences:
>Translated_252_residues MIIKLNLLRIFIISLLVIIFPLIQNQWLNLYLFDKNSFTIYKTLYFLSGLLIPVLVSITSLKNFTFYKFSNYKIKKNKEI TGKLLFIIVVTALFIFSSLFLTYLFINFKIFFNIVISNNNYLLDFNFNKYIISVVIISILLIFRKLKLIIKKIILINFLM ISSMIWYAKLNNILFNDTFLVKNHLTFDNVNSINLLLLLSLEISYYLWSYLSQANYLTDWSIPAQPNNLLISFVKIIFFY LMVILYYFIISN >Mature_252_residues MIIKLNLLRIFIISLLVIIFPLIQNQWLNLYLFDKNSFTIYKTLYFLSGLLIPVLVSITSLKNFTFYKFSNYKIKKNKEI TGKLLFIIVVTALFIFSSLFLTYLFINFKIFFNIVISNNNYLLDFNFNKYIISVVIISILLIFRKLKLIIKKIILINFLM ISSMIWYAKLNNILFNDTFLVKNHLTFDNVNSINLLLLLSLEISYYLWSYLSQANYLTDWSIPAQPNNLLISFVKIIFFY LMVILYYFIISN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29958; Mature: 29958
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIKLNLLRIFIISLLVIIFPLIQNQWLNLYLFDKNSFTIYKTLYFLSGLLIPVLVSITS CEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH LKNFTFYKFSNYKIKKNKEITGKLLFIIVVTALFIFSSLFLTYLFINFKIFFNIVISNNN HCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCC YLLDFNFNKYIISVVIISILLIFRKLKLIIKKIILINFLMISSMIWYAKLNNILFNDTFL EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEE VKNHLTFDNVNSINLLLLLSLEISYYLWSYLSQANYLTDWSIPAQPNNLLISFVKIIFFY EEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH LMVILYYFIISN HHHHHHHHHHCC >Mature Secondary Structure MIIKLNLLRIFIISLLVIIFPLIQNQWLNLYLFDKNSFTIYKTLYFLSGLLIPVLVSITS CEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH LKNFTFYKFSNYKIKKNKEITGKLLFIIVVTALFIFSSLFLTYLFINFKIFFNIVISNNN HCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCC YLLDFNFNKYIISVVIISILLIFRKLKLIIKKIILINFLMISSMIWYAKLNNILFNDTFL EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEE VKNHLTFDNVNSINLLLLLSLEISYYLWSYLSQANYLTDWSIPAQPNNLLISFVKIIFFY EEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH LMVILYYFIISN HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA