| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966154
Identifier: 123966154
GI number: 123966154
Start: 824680
End: 825639
Strand: Reverse
Name: 123966154
Synonym: P9515_09211
Alternate gene names: NA
Gene position: 825639-824680 (Counterclockwise)
Preceding gene: 123966155
Following gene: 123966153
Centisome position: 48.45
GC content: 23.44
Gene sequence:
>960_bases ATGGAAGAAAATGTAGATTCTATAGGAGATAGTTATATTAATGAAAAAGATACTTTTAAAAAGGATAACAAGAATACTAA TAAAGAAAAAGTTGCCAAAGAAAAATCAAATGAAGTAAACAAAGAAATTAATGAAGAAAAAGTTGCAAAAGAAAATTCAA ATGAAGTTAACATAGAAATTAATGAAGAAAAAATTTCAGAGGAGAATTCAAAAGAAGTAAACAAAGATATTAATAAAGAA AAAGTTGCCAAAGAAAAATCAAATGAAGTTAACAAAGAAATTAATGAAGAAAAAGTTGCAAAAGAAAATTCAAATGAAGT TAACATAGAAATTAATGAAGAAAAAGTTGCCAAAGAAAAATCAAATGAAGTAAACAAAGAAATTAATGAAGAAAAAATTT CAGAGGAGAATTCAAAAGAAGTAAACAAAGATATTAATAAAGAAAAAGTTTCCAAAGAAAATTCAAAAGAAGTAAACAAA GATATTAATAAAGAAAAAGTTGCAAAAGAAAATTCAAAAGAAGTAAACAAAGATATTAATAAAGAAAAAGTTGCAGAGGA AAATTTAAAACCTTTAAAAATAAAGCCAAAAAAGGAAATTCCTATTGAAAAAAAACCTTTTAAAGAATTTATTAATGAAC ATTTACTACCTTCAATAATTCAGGAATTTAAATTAAGAGGATTTGAAGTTAAAGAAATTAATCTAAAAAACACATCAAGA CCAATTGCTGGAGATAAATGTTGGGTTGTTTTCTGCGAAATAAAAGACATATGTAATTTCTGGCTATCCTTTGAGAAAGA AGACATAAGCTCATCAAAAAGTATTTCGTTATGTAAATCTAATCAAAAACCAAGTGTGATTGAATCATTTTTAATAGATG AAAAAAGAATAACTCTCAAATTAATCATTTCTAGAATTCTGCAAAGATTAAATGGTCAGAAATTAATTGGGATTAATTAA
Upstream 100 bases:
>100_bases TAATAATGGTTCCGAATGGTGAAAATATAGTTAATTTTAAATATTGATAAAAATATGTAAAATTCTATTTATAATAATAC CTGAAGTTTAATTTGTTGTT
Downstream 100 bases:
>100_bases AAAATCTAAAAGAATAACACCTAGTTAACTTTTTACTCAAAAATGCAATAAATAGTAAATAATAGTAATAACGAATTATG GAAAATGCCTCAACAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MEENVDSIGDSYINEKDTFKKDNKNTNKEKVAKEKSNEVNKEINEEKVAKENSNEVNIEINEEKISEENSKEVNKDINKE KVAKEKSNEVNKEINEEKVAKENSNEVNIEINEEKVAKEKSNEVNKEINEEKISEENSKEVNKDINKEKVSKENSKEVNK DINKEKVAKENSKEVNKDINKEKVAEENLKPLKIKPKKEIPIEKKPFKEFINEHLLPSIIQEFKLRGFEVKEINLKNTSR PIAGDKCWVVFCEIKDICNFWLSFEKEDISSSKSISLCKSNQKPSVIESFLIDEKRITLKLIISRILQRLNGQKLIGIN
Sequences:
>Translated_319_residues MEENVDSIGDSYINEKDTFKKDNKNTNKEKVAKEKSNEVNKEINEEKVAKENSNEVNIEINEEKISEENSKEVNKDINKE KVAKEKSNEVNKEINEEKVAKENSNEVNIEINEEKVAKEKSNEVNKEINEEKISEENSKEVNKDINKEKVSKENSKEVNK DINKEKVAKENSKEVNKDINKEKVAEENLKPLKIKPKKEIPIEKKPFKEFINEHLLPSIIQEFKLRGFEVKEINLKNTSR PIAGDKCWVVFCEIKDICNFWLSFEKEDISSSKSISLCKSNQKPSVIESFLIDEKRITLKLIISRILQRLNGQKLIGIN >Mature_319_residues MEENVDSIGDSYINEKDTFKKDNKNTNKEKVAKEKSNEVNKEINEEKVAKENSNEVNIEINEEKISEENSKEVNKDINKE KVAKEKSNEVNKEINEEKVAKENSNEVNIEINEEKVAKEKSNEVNKEINEEKISEENSKEVNKDINKEKVSKENSKEVNK DINKEKVAKENSKEVNKDINKEKVAEENLKPLKIKPKKEIPIEKKPFKEFINEHLLPSIIQEFKLRGFEVKEINLKNTSR PIAGDKCWVVFCEIKDICNFWLSFEKEDISSSKSISLCKSNQKPSVIESFLIDEKRITLKLIISRILQRLNGQKLIGIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37004; Mature: 37004
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEENVDSIGDSYINEKDTFKKDNKNTNKEKVAKEKSNEVNKEINEEKVAKENSNEVNIEI CCCCHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE NEEKISEENSKEVNKDINKEKVAKEKSNEVNKEINEEKVAKENSNEVNIEINEEKVAKEK CHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHH SNEVNKEINEEKISEENSKEVNKDINKEKVSKENSKEVNKDINKEKVAKENSKEVNKDIN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC KEKVAEENLKPLKIKPKKEIPIEKKPFKEFINEHLLPSIIQEFKLRGFEVKEINLKNTSR HHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC PIAGDKCWVVFCEIKDICNFWLSFEKEDISSSKSISLCKSNQKPSVIESFLIDEKRITLK CCCCCCEEEEEEEHHHHHHHHHHCCHHHCCCCCHHHHHHCCCCHHHHHHHHHCCHHHHHH LIISRILQRLNGQKLIGIN HHHHHHHHHHCCCEEECCC >Mature Secondary Structure MEENVDSIGDSYINEKDTFKKDNKNTNKEKVAKEKSNEVNKEINEEKVAKENSNEVNIEI CCCCHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE NEEKISEENSKEVNKDINKEKVAKEKSNEVNKEINEEKVAKENSNEVNIEINEEKVAKEK CHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHH SNEVNKEINEEKISEENSKEVNKDINKEKVSKENSKEVNKDINKEKVAKENSKEVNKDIN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC KEKVAEENLKPLKIKPKKEIPIEKKPFKEFINEHLLPSIIQEFKLRGFEVKEINLKNTSR HHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC PIAGDKCWVVFCEIKDICNFWLSFEKEDISSSKSISLCKSNQKPSVIESFLIDEKRITLK CCCCCCEEEEEEEHHHHHHHHHHCCHHHCCCCCHHHHHHCCCCHHHHHHHHHCCHHHHHH LIISRILQRLNGQKLIGIN HHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA