| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966113
Identifier: 123966113
GI number: 123966113
Start: 789641
End: 789904
Strand: Direct
Name: 123966113
Synonym: P9515_08801
Alternate gene names: NA
Gene position: 789641-789904 (Clockwise)
Preceding gene: 123966111
Following gene: 123966114
Centisome position: 46.34
GC content: 28.79
Gene sequence:
>264_bases ATGTCAGAAAATAGAAGTACATTTGATGGTATTTACAGGTTAATAGCATCGCAACCTTGGATGACCGAAAATGAGGCAAA AGTATTATTAGTAATGATGTACGCTTCAGGAACAAAGTCGTTAGGATTAGAAGGTAAAACTTTAAACAAATTTTTGGAGA GGTCACTAGAAAAGATGTGTTCTGATAATAAGGAAAATTTACAAGAATTTCTTTTGAAAATTAAAGATAAATTTCCAAAT AATGAACTACTTTCTAAAAATTAA
Upstream 100 bases:
>100_bases TCCAAATAATTTATTATAAATATTATAATTCTGTTACTTAAAAAAAAAGAAAGTAAATTTTTTCATAAAGTGAAAAAAAG TTTTTAGCTATAATTAGTAG
Downstream 100 bases:
>100_bases TATATGGAGTTTTTAAATCAAGAAGTTACTCAAGAATTTCTTAGACTTACATGGCGAAATCCTGCTTTTATGGCGATTGC AATAGCATTGATATGGATAA
Product: envelope glycoprotein-lik protein
Products: NA
Alternate protein names: Hepatitis C Virus Envelope Glycoprote
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSENRSTFDGIYRLIASQPWMTENEAKVLLVMMYASGTKSLGLEGKTLNKFLERSLEKMCSDNKENLQEFLLKIKDKFPN NELLSKN
Sequences:
>Translated_87_residues MSENRSTFDGIYRLIASQPWMTENEAKVLLVMMYASGTKSLGLEGKTLNKFLERSLEKMCSDNKENLQEFLLKIKDKFPN NELLSKN >Mature_86_residues SENRSTFDGIYRLIASQPWMTENEAKVLLVMMYASGTKSLGLEGKTLNKFLERSLEKMCSDNKENLQEFLLKIKDKFPNN ELLSKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10051; Mature: 9920
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENRSTFDGIYRLIASQPWMTENEAKVLLVMMYASGTKSLGLEGKTLNKFLERSLEKMC CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH SDNKENLQEFLLKIKDKFPNNELLSKN CCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SENRSTFDGIYRLIASQPWMTENEAKVLLVMMYASGTKSLGLEGKTLNKFLERSLEKMC CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH SDNKENLQEFLLKIKDKFPNNELLSKN CCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA