Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123966110

Identifier: 123966110

GI number: 123966110

Start: 787315

End: 787569

Strand: Direct

Name: 123966110

Synonym: P9515_08771

Alternate gene names: NA

Gene position: 787315-787569 (Clockwise)

Preceding gene: 123966109

Following gene: 123966111

Centisome position: 46.2

GC content: 31.37

Gene sequence:

>255_bases
GTGGATTTTTTTAGTATCACTAGTTTTACTAGAGAAATTTCTCGTATTGACCTAATTGGTATTTTGGTTGGGCATTTTGT
ATTTGCTTTAGCATTAACCCAAATTTTGGATTGGACATGGCTAAAGAATTTAATGAGTGAGGAGGATAAAATAAAAATGC
TCAATAGTTACACATGGAAAGACTTATTAGTTGACGGAGCTGTCATTGCAGTAGTTATTGGAATTATTTTTCTCATAGTA
AGCATATTTCTATAG

Upstream 100 bases:

>100_bases
TGAATGAGAGTAAAGAAAGTTTTTCAAAAGAAAAAATAAGTGAAGCATGGGAAAAATATAAAGAGGAAGGCGGCGCCCTT
AGTAACAAAGAAAAAAAATA

Downstream 100 bases:

>100_bases
ATGAACATTACGTATATATATTTGACATCTTTATTATCCTCATTGTTAATATTTTCCTCAATAGTAAAGTCTTTAGAAAA
AAACCGATAATAAATGTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MDFFSITSFTREISRIDLIGILVGHFVFALALTQILDWTWLKNLMSEEDKIKMLNSYTWKDLLVDGAVIAVVIGIIFLIV
SIFL

Sequences:

>Translated_84_residues
MDFFSITSFTREISRIDLIGILVGHFVFALALTQILDWTWLKNLMSEEDKIKMLNSYTWKDLLVDGAVIAVVIGIIFLIV
SIFL
>Mature_84_residues
MDFFSITSFTREISRIDLIGILVGHFVFALALTQILDWTWLKNLMSEEDKIKMLNSYTWKDLLVDGAVIAVVIGIIFLIV
SIFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9624; Mature: 9624

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFFSITSFTREISRIDLIGILVGHFVFALALTQILDWTWLKNLMSEEDKIKMLNSYTWK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DLLVDGAVIAVVIGIIFLIVSIFL
HHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDFFSITSFTREISRIDLIGILVGHFVFALALTQILDWTWLKNLMSEEDKIKMLNSYTWK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DLLVDGAVIAVVIGIIFLIVSIFL
HHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA