| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966072
Identifier: 123966072
GI number: 123966072
Start: 760147
End: 761364
Strand: Direct
Name: 123966072
Synonym: P9515_08391
Alternate gene names: NA
Gene position: 760147-761364 (Clockwise)
Preceding gene: 123966071
Following gene: 123966074
Centisome position: 44.6
GC content: 27.09
Gene sequence:
>1218_bases ATGAAAAATAGATTTTTTAAAACAAAAACCCAACGAAATTTTTCTGTGGCGATGGTTTGGATAAATGGTGGTAGCAGTGA AGATAATGAAGGTAAAAAAGGAATAAATAAAATCCTTTCATCATTATTGGGTAGAGGGTGCAAAGGTTTTGATAATTTAG AGTTTTCTGATTATATAGATTCTCATGGAGCAGAATTAAACCTCGAGACATTAGAGGATGGGACTTTAATTAGCCTTAAA TCTTTAGATGAGTATTTTTATAAACTGTTCCCTTTATTGGATTTAATAATAAATAACCCAATGCTTTTAGAAAGCCAGTT CCAAAACGTAAAGAAAAATACTATTGATTCCCTATGTAAGGAGAAGGAAAACCCATTCAACATAACTTTTGAAAAATGGA GGAAACTTGTTTATTTTAAACACCCTTATGCATATAATCCCTCTGGATATGTAAAAGATATTTCAACAATCACTTATTCT GATGTTTTAGTCGAATACAATAATTTTAAGAATAGAAATATATATCTTATTTCAAATAATTTAAAAATAAATAACAAAAA TTTTGAGTTAATTAATAAAAACAATCAGAAAAACAAACTTAAACATCTTAAAAAAAATAGGAATGATTTTGTTAGGTATG CTAGTACTTTTAAGGATTCTAATCAAATAATTTTAATGATAGGTAACCAAACATGTTCACAATCAAGTCATGAATATTTG CCTTTAAAAGTATTAGAATCACATCTTTCATATGGAATGAGCTCTGTATTATTCCAATTGTTTAGAGAAAAGAATGGTTT AACTTATGACGTTGGAGTATTTAACCCAATAAGGCAATATAATGCCCCATTTTTAATTTACCTTTCTGTCTCTAATAAGA ATGCTATTTTAGCCTTTGAAATCCTTCTTGAATTACTGAAAAATTTAGTTTCTTCTCCAATTTCGGAAAAGCAACTTAAT CTAGCGAAAGTAAAACTAAAAAGTTCATTTCTAATCTCAAACCAATCTTTAGATGAAATCTTACAGAGAAGACTTCAATT AATTGGTTACGATTTGAATCCAGATTTTGATTTAGATTGTCTTAATAAGATTGAAGAGATCATTCCAGAAGATATTTTAA AAATTACTAATAAATATTTATCGGAACCTTTTATGAGTATCTATGGTGATAAAAAAAAATGTAGTGAAATCTATCAGCTT TGGCAAAAAAATTTTTAA
Upstream 100 bases:
>100_bases TAGATAATCATCTGCGCTACTGGAATAATTTAAATAATTTCAGGAAAATACTACATTATCTATCAAAAGATAAATTTACA TTAATTGCATCAGCAAAATA
Downstream 100 bases:
>100_bases ATTTATATTTTTTCGATTTTGTCAGTGTCAATTAAAAAAGAACCTCTCCTAAATTTTATTTCAACAGTTTCAGGAGATTT AATGGATATTATTTCTCCAA
Product: insulinase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MKNRFFKTKTQRNFSVAMVWINGGSSEDNEGKKGINKILSSLLGRGCKGFDNLEFSDYIDSHGAELNLETLEDGTLISLK SLDEYFYKLFPLLDLIINNPMLLESQFQNVKKNTIDSLCKEKENPFNITFEKWRKLVYFKHPYAYNPSGYVKDISTITYS DVLVEYNNFKNRNIYLISNNLKINNKNFELINKNNQKNKLKHLKKNRNDFVRYASTFKDSNQIILMIGNQTCSQSSHEYL PLKVLESHLSYGMSSVLFQLFREKNGLTYDVGVFNPIRQYNAPFLIYLSVSNKNAILAFEILLELLKNLVSSPISEKQLN LAKVKLKSSFLISNQSLDEILQRRLQLIGYDLNPDFDLDCLNKIEEIIPEDILKITNKYLSEPFMSIYGDKKKCSEIYQL WQKNF
Sequences:
>Translated_405_residues MKNRFFKTKTQRNFSVAMVWINGGSSEDNEGKKGINKILSSLLGRGCKGFDNLEFSDYIDSHGAELNLETLEDGTLISLK SLDEYFYKLFPLLDLIINNPMLLESQFQNVKKNTIDSLCKEKENPFNITFEKWRKLVYFKHPYAYNPSGYVKDISTITYS DVLVEYNNFKNRNIYLISNNLKINNKNFELINKNNQKNKLKHLKKNRNDFVRYASTFKDSNQIILMIGNQTCSQSSHEYL PLKVLESHLSYGMSSVLFQLFREKNGLTYDVGVFNPIRQYNAPFLIYLSVSNKNAILAFEILLELLKNLVSSPISEKQLN LAKVKLKSSFLISNQSLDEILQRRLQLIGYDLNPDFDLDCLNKIEEIIPEDILKITNKYLSEPFMSIYGDKKKCSEIYQL WQKNF >Mature_405_residues MKNRFFKTKTQRNFSVAMVWINGGSSEDNEGKKGINKILSSLLGRGCKGFDNLEFSDYIDSHGAELNLETLEDGTLISLK SLDEYFYKLFPLLDLIINNPMLLESQFQNVKKNTIDSLCKEKENPFNITFEKWRKLVYFKHPYAYNPSGYVKDISTITYS DVLVEYNNFKNRNIYLISNNLKINNKNFELINKNNQKNKLKHLKKNRNDFVRYASTFKDSNQIILMIGNQTCSQSSHEYL PLKVLESHLSYGMSSVLFQLFREKNGLTYDVGVFNPIRQYNAPFLIYLSVSNKNAILAFEILLELLKNLVSSPISEKQLN LAKVKLKSSFLISNQSLDEILQRRLQLIGYDLNPDFDLDCLNKIEEIIPEDILKITNKYLSEPFMSIYGDKKKCSEIYQL WQKNF
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 47148; Mature: 47148
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRFFKTKTQRNFSVAMVWINGGSSEDNEGKKGINKILSSLLGRGCKGFDNLEFSDYID CCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH SHGAELNLETLEDGTLISLKSLDEYFYKLFPLLDLIINNPMLLESQFQNVKKNTIDSLCK CCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH EKENPFNITFEKWRKLVYFKHPYAYNPSGYVKDISTITYSDVLVEYNNFKNRNIYLISNN CCCCCCEEEHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCEEEEEECC LKINNKNFELINKNNQKNKLKHLKKNRNDFVRYASTFKDSNQIILMIGNQTCSQSSHEYL EEECCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC PLKVLESHLSYGMSSVLFQLFREKNGLTYDVGVFNPIRQYNAPFLIYLSVSNKNAILAFE HHHHHHHHHHHCHHHHHHHHHHHCCCCEEECCCCCHHHHCCCCEEEEEEECCCCCCHHHH ILLELLKNLVSSPISEKQLNLAKVKLKSSFLISNQSLDEILQRRLQLIGYDLNPDFDLDC HHHHHHHHHHCCCCCHHHHHHHHEEEHHHHEECCCCHHHHHHHHHHHHCCCCCCCCCHHH LNKIEEIIPEDILKITNKYLSEPFMSIYGDKKKCSEIYQLWQKNF HHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKNRFFKTKTQRNFSVAMVWINGGSSEDNEGKKGINKILSSLLGRGCKGFDNLEFSDYID CCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH SHGAELNLETLEDGTLISLKSLDEYFYKLFPLLDLIINNPMLLESQFQNVKKNTIDSLCK CCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH EKENPFNITFEKWRKLVYFKHPYAYNPSGYVKDISTITYSDVLVEYNNFKNRNIYLISNN CCCCCCEEEHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCEEEEEECC LKINNKNFELINKNNQKNKLKHLKKNRNDFVRYASTFKDSNQIILMIGNQTCSQSSHEYL EEECCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC PLKVLESHLSYGMSSVLFQLFREKNGLTYDVGVFNPIRQYNAPFLIYLSVSNKNAILAFE HHHHHHHHHHHCHHHHHHHHHHHCCCCEEECCCCCHHHHCCCCEEEEEEECCCCCCHHHH ILLELLKNLVSSPISEKQLNLAKVKLKSSFLISNQSLDEILQRRLQLIGYDLNPDFDLDC HHHHHHHHHHCCCCCHHHHHHHHEEEHHHHEECCCCHHHHHHHHHHHHCCCCCCCCCHHH LNKIEEIIPEDILKITNKYLSEPFMSIYGDKKKCSEIYQLWQKNF HHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]