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The map label for this gene is ccmC

Identifier: 123966053

GI number: 123966053

Start: 738005

End: 738943

Strand: Reverse

Name: ccmC

Synonym: P9515_08181

Alternate gene names: 123966053

Gene position: 738943-738005 (Counterclockwise)

Preceding gene: 123966054

Following gene: 123966051

Centisome position: 43.36

GC content: 32.8

Gene sequence:

>939_bases
ATGATATTTGATGGTTTTATCAAAAATTTGATTTACGACCCAGTATCTACCTTAGGCATTTTAATATTTTATTTTTTATT
AATTAATCTGCCAATTTCTTTATTAGCTTTATTTAATAAAAAATCCTCATCTTTTGTGAGATTTTTTACAATTTTAATTA
ATCTTTTCATAGCTTTACAGCTTATCTTCAGATGGATTTTATCTGGACATTTCCCAATAAGTAATTTATATGAATCTCTT
TATTTTTTAGTTTGGGGCATATCTCTAGGTCAATTATTAGTAGAGAAAGAATACCCAAATCCCATAATACCAGTAATAGC
AATACCTATTGAGCTTTTAACTATAGCTTTTGCATGCTTTGTTTTGCCTGATGATTTAAAACTATCTTCTAATCTTGTTC
CAGCATTGAGATCAAGCTGGTTAATTATGCATGTAAGCGTAGTAATGCTAAGTTATGCCGCGCTCATAATTGGCTCTTTA
CTTTCAGCTTCCGTACTTTTTATTAATAACAGACAACCTCTTCAACTTAGAAGCAGTTCTACAGGTATAGGAGGTTTTAG
GATGTCTAATGAGTACTCTGGCAATAATTTCAATGAGCCTATAAATTTCACTCATACGGAGGAATTAGATACTCTTAGTT
ATAGATCAATATTAGTCGGATTCGTTCTTCTTACTCTTGGTTTAATAACCGGAGCCATTTGGGCTAATGAAGCTTGGGGC
ACTTGGTGGAGTTGGGATCCTAAAGAGACATGGGCCTTCATATCTTGGTTATTCTATGCTGCCTATTTACACATGAGAAT
TAGTAGAGGCTGGCAAGGTAGAAGACCTGCCTTATTCGCAACTTCAGGCTTTTTTGTTGTACTAATATGTTATCTCGGAG
TTAATTTTTTAGGTATAGGTTTGCATAGTTATGGCTGGATATTTGGAATATTAAATTAA

Upstream 100 bases:

>100_bases
ACAAATTAATTTAAATTAAAATATTCTAAATAAACAAAAAATAAATATTTTTTAAATTACTTTATAGTTAAGTTAACTAA
TACAGTTTTTTATTCTACTG

Downstream 100 bases:

>100_bases
TTTCAAATGTTCATTCTTAGGGCTCTGAAATTATCTTTCCATTTTGAGCATCTTGGGCAACTGACCTTAATTCATCGCAA
CCCTCTTTCAATGTGGGATA

Product: putative heme transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MIFDGFIKNLIYDPVSTLGILIFYFLLINLPISLLALFNKKSSSFVRFFTILINLFIALQLIFRWILSGHFPISNLYESL
YFLVWGISLGQLLVEKEYPNPIIPVIAIPIELLTIAFACFVLPDDLKLSSNLVPALRSSWLIMHVSVVMLSYAALIIGSL
LSASVLFINNRQPLQLRSSSTGIGGFRMSNEYSGNNFNEPINFTHTEELDTLSYRSILVGFVLLTLGLITGAIWANEAWG
TWWSWDPKETWAFISWLFYAAYLHMRISRGWQGRRPALFATSGFFVVLICYLGVNFLGIGLHSYGWIFGILN

Sequences:

>Translated_312_residues
MIFDGFIKNLIYDPVSTLGILIFYFLLINLPISLLALFNKKSSSFVRFFTILINLFIALQLIFRWILSGHFPISNLYESL
YFLVWGISLGQLLVEKEYPNPIIPVIAIPIELLTIAFACFVLPDDLKLSSNLVPALRSSWLIMHVSVVMLSYAALIIGSL
LSASVLFINNRQPLQLRSSSTGIGGFRMSNEYSGNNFNEPINFTHTEELDTLSYRSILVGFVLLTLGLITGAIWANEAWG
TWWSWDPKETWAFISWLFYAAYLHMRISRGWQGRRPALFATSGFFVVLICYLGVNFLGIGLHSYGWIFGILN
>Mature_312_residues
MIFDGFIKNLIYDPVSTLGILIFYFLLINLPISLLALFNKKSSSFVRFFTILINLFIALQLIFRWILSGHFPISNLYESL
YFLVWGISLGQLLVEKEYPNPIIPVIAIPIELLTIAFACFVLPDDLKLSSNLVPALRSSWLIMHVSVVMLSYAALIIGSL
LSASVLFINNRQPLQLRSSSTGIGGFRMSNEYSGNNFNEPINFTHTEELDTLSYRSILVGFVLLTLGLITGAIWANEAWG
TWWSWDPKETWAFISWLFYAAYLHMRISRGWQGRRPALFATSGFFVVLICYLGVNFLGIGLHSYGWIFGILN

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CCSA_PROM5 (A2BW66)

Other databases:

- EMBL:   CP000552
- RefSeq:   YP_001011134.1
- STRING:   A2BW66
- GeneID:   4719400
- GenomeReviews:   CP000552_GR
- KEGG:   pmc:P9515_08181
- eggNOG:   COG0755
- HOGENOM:   HBG733666
- OMA:   YNLPALV
- ProtClustDB:   CLSK919431
- BioCyc:   PMAR167542:P9515ORF_0859-MONOMER
- HAMAP:   MF_01391
- InterPro:   IPR002541
- InterPro:   IPR017562
- TIGRFAMs:   TIGR03144

Pfam domain/function: PF01578 Cytochrom_C_asm

EC number: NA

Molecular weight: Translated: 35391; Mature: 35391

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1941a3c0)-; HASH(0x17b0a920)-; HASH(0x1954f620)-; HASH(0x19375a18)-; HASH(0x189036dc)-; HASH(0x196f9810)-; HASH(0x1984c8dc)-; HASH(0x192826a4)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFDGFIKNLIYDPVSTLGILIFYFLLINLPISLLALFNKKSSSFVRFFTILINLFIALQ
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LIFRWILSGHFPISNLYESLYFLVWGISLGQLLVEKEYPNPIIPVIAIPIELLTIAFACF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
VLPDDLKLSSNLVPALRSSWLIMHVSVVMLSYAALIIGSLLSASVLFINNRQPLQLRSSS
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCC
TGIGGFRMSNEYSGNNFNEPINFTHTEELDTLSYRSILVGFVLLTLGLITGAIWANEAWG
CCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TWWSWDPKETWAFISWLFYAAYLHMRISRGWQGRRPALFATSGFFVVLICYLGVNFLGIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHH
LHSYGWIFGILN
HHHHHHHEEECH
>Mature Secondary Structure
MIFDGFIKNLIYDPVSTLGILIFYFLLINLPISLLALFNKKSSSFVRFFTILINLFIALQ
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LIFRWILSGHFPISNLYESLYFLVWGISLGQLLVEKEYPNPIIPVIAIPIELLTIAFACF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
VLPDDLKLSSNLVPALRSSWLIMHVSVVMLSYAALIIGSLLSASVLFINNRQPLQLRSSS
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCC
TGIGGFRMSNEYSGNNFNEPINFTHTEELDTLSYRSILVGFVLLTLGLITGAIWANEAWG
CCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TWWSWDPKETWAFISWLFYAAYLHMRISRGWQGRRPALFATSGFFVVLICYLGVNFLGIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHH
LHSYGWIFGILN
HHHHHHHEEECH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA