| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966010
Identifier: 123966010
GI number: 123966010
Start: 701861
End: 702448
Strand: Direct
Name: 123966010
Synonym: P9515_07751
Alternate gene names: NA
Gene position: 701861-702448 (Clockwise)
Preceding gene: 123966008
Following gene: 123966011
Centisome position: 41.18
GC content: 36.05
Gene sequence:
>588_bases ATGAATTTCCGCACTTATGGGGAGTTCTCATCTAAGACAGTAAGAATAATAACTGGTCAGTCAGTTCTTATAGATCCATC ATCAAGACCAAAAGGTACCTGTCTTGAAGTCGAGAGTGGAATTGCAAGAGTATATTGCCCTTGCGAAGAAACAGAGGGTA TGACTCTTGCTTTTTTACAGTCAGGAGATCAATTAAGAACCGATTTATTATGTAGTGAAGGGGTTTGTGTAGAAGCTTTA ACCGACTTATCATTTCATAGTAATGTAAACATTTCTGAAAATATTGGATTTGATGCTGTTAATGAGTGGACTCTTCAACT CCTAAGAATTAGACATTTAGGCAATGCTGAACAAAGATTACAAGCTCTTTTCTCAATATTAGTAAACCGTTTAGGAAGAA GATGTGGTCAATGGTGTGAATTACCTTTTAGACTTACTCATGAAAGGATAGGAGAATTAATAGGGTCAACAAGAGTAACT TCAACCAGATTAATTTCTAAACTACGTTCATCAGAGTTGTTAATAGCACCAATTGGAACTCAGACAGTAAGTGTAGCCCC TTCTTTTATTGAATCCTCACCTCTATAA
Upstream 100 bases:
>100_bases TAAAGAAAAACATCAGAACAAATAATGTAAATAAGAATTTATTGCAACAAGTGCAAAAATGACGCATAATTGATAATAAT TCTCATTATCAAAATAAATT
Downstream 100 bases:
>100_bases ATAATTATGTATAGATCAGAATCTATAATCAATAACTTATTTCTAGAAGTTGATTCATTAAGTCTAAGGATTACTAATAT TAAAAATGCTTACTACAACA
Product: Crp family regulatory proteins
Products: NA
Alternate protein names: CAMP Family Transcriptional Regulator; Crp Family Regulatory Protein; Crp Family Regulatory Proteins; CRP/FNR Family Transcriptional Regulator; Bacterial Regulatory Protein Crp Family
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MNFRTYGEFSSKTVRIITGQSVLIDPSSRPKGTCLEVESGIARVYCPCEETEGMTLAFLQSGDQLRTDLLCSEGVCVEAL TDLSFHSNVNISENIGFDAVNEWTLQLLRIRHLGNAEQRLQALFSILVNRLGRRCGQWCELPFRLTHERIGELIGSTRVT STRLISKLRSSELLIAPIGTQTVSVAPSFIESSPL
Sequences:
>Translated_195_residues MNFRTYGEFSSKTVRIITGQSVLIDPSSRPKGTCLEVESGIARVYCPCEETEGMTLAFLQSGDQLRTDLLCSEGVCVEAL TDLSFHSNVNISENIGFDAVNEWTLQLLRIRHLGNAEQRLQALFSILVNRLGRRCGQWCELPFRLTHERIGELIGSTRVT STRLISKLRSSELLIAPIGTQTVSVAPSFIESSPL >Mature_195_residues MNFRTYGEFSSKTVRIITGQSVLIDPSSRPKGTCLEVESGIARVYCPCEETEGMTLAFLQSGDQLRTDLLCSEGVCVEAL TDLSFHSNVNISENIGFDAVNEWTLQLLRIRHLGNAEQRLQALFSILVNRLGRRCGQWCELPFRLTHERIGELIGSTRVT STRLISKLRSSELLIAPIGTQTVSVAPSFIESSPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21634; Mature: 21634
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFRTYGEFSSKTVRIITGQSVLIDPSSRPKGTCLEVESGIARVYCPCEETEGMTLAFLQ CCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCEEEECCCCEEEEECCCCCCCCEEEEEC SGDQLRTDLLCSEGVCVEALTDLSFHSNVNISENIGFDAVNEWTLQLLRIRHLGNAEQRL CCCHHHHHHHHCCCCHHHHHHHCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH QALFSILVNRLGRRCGQWCELPFRLTHERIGELIGSTRVTSTRLISKLRSSELLIAPIGT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCC QTVSVAPSFIESSPL CEEHHCHHHHCCCCC >Mature Secondary Structure MNFRTYGEFSSKTVRIITGQSVLIDPSSRPKGTCLEVESGIARVYCPCEETEGMTLAFLQ CCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCEEEECCCCEEEEECCCCCCCCEEEEEC SGDQLRTDLLCSEGVCVEALTDLSFHSNVNISENIGFDAVNEWTLQLLRIRHLGNAEQRL CCCHHHHHHHHCCCCHHHHHHHCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH QALFSILVNRLGRRCGQWCELPFRLTHERIGELIGSTRVTSTRLISKLRSSELLIAPIGT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCC QTVSVAPSFIESSPL CEEHHCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA