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The map label for this gene is hcaE [H]

Identifier: 123966007

GI number: 123966007

Start: 699308

End: 700627

Strand: Direct

Name: hcaE [H]

Synonym: P9515_07721

Alternate gene names: 123966007

Gene position: 699308-700627 (Clockwise)

Preceding gene: 123966005

Following gene: 123966008

Centisome position: 41.03

GC content: 26.29

Gene sequence:

>1320_bases
ATGGAAAATAAGCAAATTAATTTTTTTAAAGCTAAAGATATTAATACCGTTTTAAAACCTTATAAAAAGGGTACTGTAGT
TAATATCGATAACTTTGAGGCGAGAGAAAGACAAAAAGAATTAAAGACAGGTTTATATGGATGGTATGCAATTTGCCCTT
CAAATGTACTTAAGAAAAATAAGATTCATTATTTCTCCTTATTTGATGAACCTCTTCTTCTATTTAGAGACAATAAAAAT
AATGTAAGATGTATCAAAAATATTTGTCCCCATAGGGGGGCCTCTTTTTATGGTGGATCAATTTCTAATGGAGAATTAAC
TTGCCCATACCATGGAGCAAGATTCAGTTCTGAAGGTAATTGTCAGAATATTGATAGCATAACTTGTAGACATATTGTTG
ATAATAATTATGATAATTATGCTAAGAGGATACACTTATCTCAATACAAAACAGTAGAAGAGGATAACTACATTTTTATA
TATTTTTCCGATAAGTCTGAGATGGATTTGAATAATATTAAAGAAGAGCCATCAATTAGTAATTATGAATTAATTAGTAA
CGGATTTTCTATTGAAGACTCAGTATCAGAAGAGGTTTTAGTTGATTTTAAATGTGATTGGTCAAGAATAATTGAAAATC
ATTTAGATATTCTTCACATATTTTGGGTACATGGAGATACAATTCCAGATAAAGAAGTAAATAAAAATGTTTTGGTAAGT
TTTAATCAGAAAATAAATATCAATCCAAATTATATTGAAAGCATATATTTCTATAAAAAAAATCCAACAAAAGAATTTAT
AAGAATAAAGTATATTCCTCCAGGAAGAATTTTAATTTATAAGGGAGATCCAGCTGTTTCAAGGTATGTTCAAGTGCTTG
ATCATATCCCCTTAGGCGAAAATAAAGCAAGAGTAATTGTTAGACATTACAGGAAATTTCTTAAAAACAAATTACTTAAT
AACCTAATATTGTTTAAAGAAAATCAAAAAAAGATTTTTTATAAAATTTTTAATGAAGATTACATGATTCTTAAAACCCA
GACTTACAATCATAAGATGGGATTAATAAAAAATGATGAGATAAAACTACTTGGTGAAGATAGAATGATTAATTATTTCT
GGAATTGGTATAAAAAATCGGAAGAAAAGGATACTCCATGGAAATATATAAATAATAAAGAACTTAACGTTTATGATGAA
ATTATATTTAAATATCCTCCCGAAATTAAGAAATTAGAAGTAATTAATAATATCAATATAATAAGAAAAGCATTTATAAG
ATATGCTGCCCCACTTATCTTTTTACTGCTAATAATATAA

Upstream 100 bases:

>100_bases
GCTACAAATGATAGAGAATTTTTCTTTTATCATAATTTGATTATTTACTTGAGTTATAGTTCCGAAAGATAACTTGCCAA
TTAAAAAAAGAGATTAGTTT

Downstream 100 bases:

>100_bases
CTTTGATGAAAAAAGTTAATAGACCAGCTTGGCTTAACTGGCTTTATCTTATGATATTTCTTTTAAGCTCAATACAGTTA
TTTATATTTTGGAGTAGCAA

Product: Rieske iron-sulfur protein 2Fe-2S subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MENKQINFFKAKDINTVLKPYKKGTVVNIDNFEARERQKELKTGLYGWYAICPSNVLKKNKIHYFSLFDEPLLLFRDNKN
NVRCIKNICPHRGASFYGGSISNGELTCPYHGARFSSEGNCQNIDSITCRHIVDNNYDNYAKRIHLSQYKTVEEDNYIFI
YFSDKSEMDLNNIKEEPSISNYELISNGFSIEDSVSEEVLVDFKCDWSRIIENHLDILHIFWVHGDTIPDKEVNKNVLVS
FNQKININPNYIESIYFYKKNPTKEFIRIKYIPPGRILIYKGDPAVSRYVQVLDHIPLGENKARVIVRHYRKFLKNKLLN
NLILFKENQKKIFYKIFNEDYMILKTQTYNHKMGLIKNDEIKLLGEDRMINYFWNWYKKSEEKDTPWKYINNKELNVYDE
IIFKYPPEIKKLEVINNINIIRKAFIRYAAPLIFLLLII

Sequences:

>Translated_439_residues
MENKQINFFKAKDINTVLKPYKKGTVVNIDNFEARERQKELKTGLYGWYAICPSNVLKKNKIHYFSLFDEPLLLFRDNKN
NVRCIKNICPHRGASFYGGSISNGELTCPYHGARFSSEGNCQNIDSITCRHIVDNNYDNYAKRIHLSQYKTVEEDNYIFI
YFSDKSEMDLNNIKEEPSISNYELISNGFSIEDSVSEEVLVDFKCDWSRIIENHLDILHIFWVHGDTIPDKEVNKNVLVS
FNQKININPNYIESIYFYKKNPTKEFIRIKYIPPGRILIYKGDPAVSRYVQVLDHIPLGENKARVIVRHYRKFLKNKLLN
NLILFKENQKKIFYKIFNEDYMILKTQTYNHKMGLIKNDEIKLLGEDRMINYFWNWYKKSEEKDTPWKYINNKELNVYDE
IIFKYPPEIKKLEVINNINIIRKAFIRYAAPLIFLLLII
>Mature_439_residues
MENKQINFFKAKDINTVLKPYKKGTVVNIDNFEARERQKELKTGLYGWYAICPSNVLKKNKIHYFSLFDEPLLLFRDNKN
NVRCIKNICPHRGASFYGGSISNGELTCPYHGARFSSEGNCQNIDSITCRHIVDNNYDNYAKRIHLSQYKTVEEDNYIFI
YFSDKSEMDLNNIKEEPSISNYELISNGFSIEDSVSEEVLVDFKCDWSRIIENHLDILHIFWVHGDTIPDKEVNKNVLVS
FNQKININPNYIESIYFYKKNPTKEFIRIKYIPPGRILIYKGDPAVSRYVQVLDHIPLGENKARVIVRHYRKFLKNKLLN
NLILFKENQKKIFYKIFNEDYMILKTQTYNHKMGLIKNDEIKLLGEDRMINYFWNWYKKSEEKDTPWKYINNKELNVYDE
IIFKYPPEIKKLEVINNINIIRKAFIRYAAPLIFLLLII

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 52183; Mature: 52183

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKQINFFKAKDINTVLKPYKKGTVVNIDNFEARERQKELKTGLYGWYAICPSNVLKKN
CCCCEEEEEECCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEEEECCHHHHHCC
KIHYFSLFDEPLLLFRDNKNNVRCIKNICPHRGASFYGGSISNGELTCPYHGARFSSEGN
CEEEEEECCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
CQNIDSITCRHIVDNNYDNYAKRIHLSQYKTVEEDNYIFIYFSDKSEMDLNNIKEEPSIS
CCCCCCEEEEHHHCCCCHHHHHEEEHHHHCEECCCCEEEEEECCCCCCCHHHCCCCCCCC
NYELISNGFSIEDSVSEEVLVDFKCDWSRIIENHLDILHIFWVHGDTIPDKEVNKNVLVS
CCCEECCCCCCCCCCCCEEEEEEECCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEE
FNQKININPNYIESIYFYKKNPTKEFIRIKYIPPGRILIYKGDPAVSRYVQVLDHIPLGE
ECCEEECCCCEEEEEEEEECCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHCCCCCC
NKARVIVRHYRKFLKNKLLNNLILFKENQKKIFYKIFNEDYMILKTQTYNHKMGLIKNDE
CHHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEEEEECCCEEEEEEEECCCEECCEECCC
IKLLGEDRMINYFWNWYKKSEEKDTPWKYINNKELNVYDEIIFKYPPEIKKLEVINNINI
EEEEECCCEEEHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEHHHHHHHH
IRKAFIRYAAPLIFLLLII
HHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MENKQINFFKAKDINTVLKPYKKGTVVNIDNFEARERQKELKTGLYGWYAICPSNVLKKN
CCCCEEEEEECCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEEEECCHHHHHCC
KIHYFSLFDEPLLLFRDNKNNVRCIKNICPHRGASFYGGSISNGELTCPYHGARFSSEGN
CEEEEEECCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
CQNIDSITCRHIVDNNYDNYAKRIHLSQYKTVEEDNYIFIYFSDKSEMDLNNIKEEPSIS
CCCCCCEEEEHHHCCCCHHHHHEEEHHHHCEECCCCEEEEEECCCCCCCHHHCCCCCCCC
NYELISNGFSIEDSVSEEVLVDFKCDWSRIIENHLDILHIFWVHGDTIPDKEVNKNVLVS
CCCEECCCCCCCCCCCCEEEEEEECCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEE
FNQKININPNYIESIYFYKKNPTKEFIRIKYIPPGRILIYKGDPAVSRYVQVLDHIPLGE
ECCEEECCCCEEEEEEEEECCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHCCCCCC
NKARVIVRHYRKFLKNKLLNNLILFKENQKKIFYKIFNEDYMILKTQTYNHKMGLIKNDE
CHHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEEEEECCCEEEEEEEECCCEECCEECCC
IKLLGEDRMINYFWNWYKKSEEKDTPWKYINNKELNVYDEIIFKYPPEIKKLEVINNINI
EEEEECCCEEEHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEHHHHHHHH
IRKAFIRYAAPLIFLLLII
HHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704279 [H]