| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965948
Identifier: 123965948
GI number: 123965948
Start: 648673
End: 648930
Strand: Direct
Name: 123965948
Synonym: P9515_07131
Alternate gene names: NA
Gene position: 648673-648930 (Clockwise)
Preceding gene: 123965947
Following gene: 123965950
Centisome position: 38.06
GC content: 27.91
Gene sequence:
>258_bases ATGAGTCAAATAAATCAAGAGAAAATCATTGAAGCTAAATATGATAATTCTTTAAACTCAAAAGTTTCTCTAGAAACAGA GCTTTCAGAAAGTCTTTATGAAACGATGAAAGATTTCGTCTTACATAATCCTACTTGGGATCAATATAAACTTATAAATT CTGCTTTAGCTACTTTTCTTATTCAAAATGGTTGTACTGATAATTCAGTTTCCGAGATTTACATAAATCAACTTTTTTCG CCTTCTAAGTCTTTTTAA
Upstream 100 bases:
>100_bases ACATGAGTCTCGTTTGATAATGGTATATGACTGATAAAAATATATTTTTGACTTTTAAAAAAAAATAGACAATTATATTT AAACCTAAGTTTTTGTTTTT
Downstream 100 bases:
>100_bases CTTTTAAACAAGCTCTTCTGCTTATAGCCATCATTGTTAAAGTTGGACTCTGCCATGAAGAAGTGGGCCAACATGCACCA TCTAATACAAGAACATTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSQINQEKIIEAKYDNSLNSKVSLETELSESLYETMKDFVLHNPTWDQYKLINSALATFLIQNGCTDNSVSEIYINQLFS PSKSF
Sequences:
>Translated_85_residues MSQINQEKIIEAKYDNSLNSKVSLETELSESLYETMKDFVLHNPTWDQYKLINSALATFLIQNGCTDNSVSEIYINQLFS PSKSF >Mature_84_residues SQINQEKIIEAKYDNSLNSKVSLETELSESLYETMKDFVLHNPTWDQYKLINSALATFLIQNGCTDNSVSEIYINQLFSP SKSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9758; Mature: 9627
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQINQEKIIEAKYDNSLNSKVSLETELSESLYETMKDFVLHNPTWDQYKLINSALATFL CCCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IQNGCTDNSVSEIYINQLFSPSKSF HHCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure SQINQEKIIEAKYDNSLNSKVSLETELSESLYETMKDFVLHNPTWDQYKLINSALATFL CCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IQNGCTDNSVSEIYINQLFSPSKSF HHCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA