Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123965939

Identifier: 123965939

GI number: 123965939

Start: 637325

End: 638257

Strand: Reverse

Name: 123965939

Synonym: P9515_07041

Alternate gene names: NA

Gene position: 638257-637325 (Counterclockwise)

Preceding gene: 123965940

Following gene: 123965937

Centisome position: 37.45

GC content: 28.83

Gene sequence:

>933_bases
ATGATAGATAAATTCCCATCCATATGTAAAGAGCCTATTGATACTTTACAGATCAATATAGGTTATAAATGTAATCAAGC
ATGCAGGCATTGCCACGTAAATTCAAGCCCATTACGTACTGAAAAAATGTCTAATGAAATAATTTCTCTTATTCCAAAAA
TAATAGATAAATATAAAATCAAAACTTTAGATATTACTGGAGGAGCACCTGAAATGCATCCTGAATTTAGAAATTTAATC
ACAAGTTTAAGTAATAAAAATATTGATATTATTGATAGATGTAACTTAACAATTTTCTTTGAAAAGGGGTATGAAGATTT
ACCGCAATTTCTTGCGAATAATAATGTAATAGTTACAGCATCACTTCCATGCTATGAAAAAAATAATGTAGAGGAACAAA
GGGGCTTCGGGGTCTTTGATAAAAGTATTAATGCTTTAAAAATACTCAATAAACTGGGGTATGGAAAAAGTAAAAATGAA
CTGCAATTAAATCTAGTTTATAATCCCGTAAATCCAGTACTTCCTCCATCTCAAGAAATCCTACAAGCTGATTATAAAAG
AATTCTTTTTGAGAAATATGATATCTCATTTAATAATCTTTATACGATTACTAATATGCCAATTAATAGATACGCAGATT
CCCTTAAGAGAGAGGATAAACTTAGTTCTTATTACAAACTACTCAAAGAAAATTTTAATAAAAATAATCTAGAAAACCTT
ATGTGCAAAAAAACTATAAGTGTTAATTGGCAAGGACAAATATATGATTGTGACTTTAACCAACAAATAAATTTACAGGA
AAATAAAGGACCAAAGACTCTTTTTGATTTAATGAATAAATCATTTAAATTTAATTATAGAGTAGCTGTTAAAGAACATT
GTTTTGCTTGCACCGCAGGGGCTGGTTCAAGCTGTGGAGGTACTTTATCTTAG

Upstream 100 bases:

>100_bases
AGAATATATAAATTGGTTTATTGAATTTGTGAAAAATCGTTCCAAAATAAAAAAAAACTTAATTTAATTTATCCAAACTA
AACTTAAAATTATTCCAATT

Downstream 100 bases:

>100_bases
TTTTCTCTAAACACAATTAGGACATATAGCTCTAACATTTAACGAAGATTCAATAAGTTTAAAACCATTAACTTTTGCGG
CTACTTTACCAGCCTTTAAC

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; L-Asparaginase II; Radical SAM Superfamily Protein; Radical SAM Family Protein; Fe-S Oxidoreductases; NifB/MoaA Family Fe-S Oxidoreductase; Fe-S Oxidoreductase Of MoaA/NifB/PqqE Family

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MIDKFPSICKEPIDTLQINIGYKCNQACRHCHVNSSPLRTEKMSNEIISLIPKIIDKYKIKTLDITGGAPEMHPEFRNLI
TSLSNKNIDIIDRCNLTIFFEKGYEDLPQFLANNNVIVTASLPCYEKNNVEEQRGFGVFDKSINALKILNKLGYGKSKNE
LQLNLVYNPVNPVLPPSQEILQADYKRILFEKYDISFNNLYTITNMPINRYADSLKREDKLSSYYKLLKENFNKNNLENL
MCKKTISVNWQGQIYDCDFNQQINLQENKGPKTLFDLMNKSFKFNYRVAVKEHCFACTAGAGSSCGGTLS

Sequences:

>Translated_310_residues
MIDKFPSICKEPIDTLQINIGYKCNQACRHCHVNSSPLRTEKMSNEIISLIPKIIDKYKIKTLDITGGAPEMHPEFRNLI
TSLSNKNIDIIDRCNLTIFFEKGYEDLPQFLANNNVIVTASLPCYEKNNVEEQRGFGVFDKSINALKILNKLGYGKSKNE
LQLNLVYNPVNPVLPPSQEILQADYKRILFEKYDISFNNLYTITNMPINRYADSLKREDKLSSYYKLLKENFNKNNLENL
MCKKTISVNWQGQIYDCDFNQQINLQENKGPKTLFDLMNKSFKFNYRVAVKEHCFACTAGAGSSCGGTLS
>Mature_310_residues
MIDKFPSICKEPIDTLQINIGYKCNQACRHCHVNSSPLRTEKMSNEIISLIPKIIDKYKIKTLDITGGAPEMHPEFRNLI
TSLSNKNIDIIDRCNLTIFFEKGYEDLPQFLANNNVIVTASLPCYEKNNVEEQRGFGVFDKSINALKILNKLGYGKSKNE
LQLNLVYNPVNPVLPPSQEILQADYKRILFEKYDISFNNLYTITNMPINRYADSLKREDKLSSYYKLLKENFNKNNLENL
MCKKTISVNWQGQIYDCDFNQQINLQENKGPKTLFDLMNKSFKFNYRVAVKEHCFACTAGAGSSCGGTLS

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35535; Mature: 35535

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDKFPSICKEPIDTLQINIGYKCNQACRHCHVNSSPLRTEKMSNEIISLIPKIIDKYKI
CCCCCHHHHHCCHHEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEE
KTLDITGGAPEMHPEFRNLITSLSNKNIDIIDRCNLTIFFEKGYEDLPQFLANNNVIVTA
EEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCEEEEEECCHHHHHHHHCCCCEEEEE
SLPCYEKNNVEEQRGFGVFDKSINALKILNKLGYGKSKNELQLNLVYNPVNPVLPPSQEI
ECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHH
LQADYKRILFEKYDISFNNLYTITNMPINRYADSLKREDKLSSYYKLLKENFNKNNLENL
HHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
MCKKTISVNWQGQIYDCDFNQQINLQENKGPKTLFDLMNKSFKFNYRVAVKEHCFACTAG
HHHHEEEEEECCEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEEHHCCEEEECC
AGSSCGGTLS
CCCCCCCCCC
>Mature Secondary Structure
MIDKFPSICKEPIDTLQINIGYKCNQACRHCHVNSSPLRTEKMSNEIISLIPKIIDKYKI
CCCCCHHHHHCCHHEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEE
KTLDITGGAPEMHPEFRNLITSLSNKNIDIIDRCNLTIFFEKGYEDLPQFLANNNVIVTA
EEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCEEEEEECCHHHHHHHHCCCCEEEEE
SLPCYEKNNVEEQRGFGVFDKSINALKILNKLGYGKSKNELQLNLVYNPVNPVLPPSQEI
ECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHH
LQADYKRILFEKYDISFNNLYTITNMPINRYADSLKREDKLSSYYKLLKENFNKNNLENL
HHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
MCKKTISVNWQGQIYDCDFNQQINLQENKGPKTLFDLMNKSFKFNYRVAVKEHCFACTAG
HHHHEEEEEECCEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEEHHCCEEEECC
AGSSCGGTLS
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA