| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965900
Identifier: 123965900
GI number: 123965900
Start: 600832
End: 602157
Strand: Direct
Name: 123965900
Synonym: P9515_06651
Alternate gene names: NA
Gene position: 600832-602157 (Clockwise)
Preceding gene: 123965892
Following gene: 123965901
Centisome position: 35.26
GC content: 28.58
Gene sequence:
>1326_bases GTGTCTAATATTAGTAAAGAAAACTTATTAACGGATTTAATAAAATTTCCTAAAAAAAATATATTTATAATCTTACTTGT TTTGGGTTTTGGAGAATGGTTTTTAAGTGATGTAATAAACTTTGCGGGCGGTTCAATAGGCTTTTTGATTTTATGTTTTG GTGGATATTTTTATCTGAAAAATGAAAAACCAAAATTTAATGAGCCAAAGAATTTAAATGGTTGGATAAACCTTTGTAAT GAGGATTTAGATTTCTTTGAGGAAATTGAATTGAATAATAATTTGGAAAAAGAAAATATCAAAAGGAAACAATCTCTTAA ATCAATAATTTATAGAGAAAAAAAAGAAGAAATTTATTGTATCGGGCAGAACAATTTTGATTCGAATAATGCATTATTTA TAAATTACTTTAAAGAAGAAAGGTACGATTTAAATTTCATTGAGAAACTTCCAAAATATAATTCTTCTGAAATGATTCCT GAAGAAATTTTGAATAGTGACGCTATTTTGTATTTTTTAAAGTTACCCTTATCCGCAAATGATTTTTTATGGTTAGAAAA ACTTCCTAAAAGTATGCCTATTTGGTTAGTTGCTTTACCTAAAAATGGATTAGACTATAAAAAAGAATTAGAGGAATTAA AGGCTCAGATTTCTGGAGATTATTTAAACAGAATAATTATATTTGACACAACTAAAAAGGAACTTATTAGCATACCATTC TCTTTACGCAAGTTTTTTATTAGTTCAAGTAGCAATATTGAAAATACAAAAAAAAGACTTTTGAAGAGATTGCATATTAA TTGGCAATCTGAGATTGAGGGGATAAGAAGACTTCAATTGAAGGATTTACAGAGGAGAAATCAGATAATGGTAGCCACTT CGGTATTCTTTTCTCCAATTCCATCCATAGATGTTTTATCAATGACTGTTTTAAATTCCTTGATGATTAAAGAAATCAAA TCTATATGGGGATGTAATTGGTCTCCAGAAATATTGGATAAAGTATCTAAGCAAATAATAAAAACTGCAATTGCGCAAGG AGTAATAGAGTGGAGTGGCCAGACGTTATTAGGTCTAACAAAATTGCATGGCCCAAATTGGCTAGTAACTGGATCATTCC AAGCAATAAGTGCAGCATATTTAACCAGAGTAGTATCAAGTTCTTTGGCAGATTTCATGGCAATAACAAAGGGAGTCTCA GAACCTGACTTGGAATTTATAAAAGAAAATTCTGAAAAAATTGTTGAAAAAGCATTTGAAAAAGAGAAAATAAATTGGAA ATCACTCATATCTGATTTAAAAAACCCATTAATGGGACTAACTTAA
Upstream 100 bases:
>100_bases ATTGAACCTTAAATTTCTTATCTAAAAATTAAAGAGTTATGAAATTTTACTTTTTTCATTCACAAATTGCACTAAAATAG AAGAAAGATATTAAAGAATC
Downstream 100 bases:
>100_bases AAGTCTGAAACGATATCTTTCTTGAAAAAAATGAGAAAAAAGTTTTTACTTTTAATTTTTTCTTTTCTAATTTGTCTTAG TGCAAATTCTTGTAAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MSNISKENLLTDLIKFPKKNIFIILLVLGFGEWFLSDVINFAGGSIGFLILCFGGYFYLKNEKPKFNEPKNLNGWINLCN EDLDFFEEIELNNNLEKENIKRKQSLKSIIYREKKEEIYCIGQNNFDSNNALFINYFKEERYDLNFIEKLPKYNSSEMIP EEILNSDAILYFLKLPLSANDFLWLEKLPKSMPIWLVALPKNGLDYKKELEELKAQISGDYLNRIIIFDTTKKELISIPF SLRKFFISSSSNIENTKKRLLKRLHINWQSEIEGIRRLQLKDLQRRNQIMVATSVFFSPIPSIDVLSMTVLNSLMIKEIK SIWGCNWSPEILDKVSKQIIKTAIAQGVIEWSGQTLLGLTKLHGPNWLVTGSFQAISAAYLTRVVSSSLADFMAITKGVS EPDLEFIKENSEKIVEKAFEKEKINWKSLISDLKNPLMGLT
Sequences:
>Translated_441_residues MSNISKENLLTDLIKFPKKNIFIILLVLGFGEWFLSDVINFAGGSIGFLILCFGGYFYLKNEKPKFNEPKNLNGWINLCN EDLDFFEEIELNNNLEKENIKRKQSLKSIIYREKKEEIYCIGQNNFDSNNALFINYFKEERYDLNFIEKLPKYNSSEMIP EEILNSDAILYFLKLPLSANDFLWLEKLPKSMPIWLVALPKNGLDYKKELEELKAQISGDYLNRIIIFDTTKKELISIPF SLRKFFISSSSNIENTKKRLLKRLHINWQSEIEGIRRLQLKDLQRRNQIMVATSVFFSPIPSIDVLSMTVLNSLMIKEIK SIWGCNWSPEILDKVSKQIIKTAIAQGVIEWSGQTLLGLTKLHGPNWLVTGSFQAISAAYLTRVVSSSLADFMAITKGVS EPDLEFIKENSEKIVEKAFEKEKINWKSLISDLKNPLMGLT >Mature_440_residues SNISKENLLTDLIKFPKKNIFIILLVLGFGEWFLSDVINFAGGSIGFLILCFGGYFYLKNEKPKFNEPKNLNGWINLCNE DLDFFEEIELNNNLEKENIKRKQSLKSIIYREKKEEIYCIGQNNFDSNNALFINYFKEERYDLNFIEKLPKYNSSEMIPE EILNSDAILYFLKLPLSANDFLWLEKLPKSMPIWLVALPKNGLDYKKELEELKAQISGDYLNRIIIFDTTKKELISIPFS LRKFFISSSSNIENTKKRLLKRLHINWQSEIEGIRRLQLKDLQRRNQIMVATSVFFSPIPSIDVLSMTVLNSLMIKEIKS IWGCNWSPEILDKVSKQIIKTAIAQGVIEWSGQTLLGLTKLHGPNWLVTGSFQAISAAYLTRVVSSSLADFMAITKGVSE PDLEFIKENSEKIVEKAFEKEKINWKSLISDLKNPLMGLT
Specific function: Unknown
COG id: COG1100
COG function: function code R; GTPase SAR1 and related small G proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50932; Mature: 50801
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNISKENLLTDLIKFPKKNIFIILLVLGFGEWFLSDVINFAGGSIGFLILCFGGYFYLK CCCCCHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCEEEEE NEKPKFNEPKNLNGWINLCNEDLDFFEEIELNNNLEKENIKRKQSLKSIIYREKKEEIYC CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE IGQNNFDSNNALFINYFKEERYDLNFIEKLPKYNSSEMIPEEILNSDAILYFLKLPLSAN EECCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHCCCEEEEEEECCCCCC DFLWLEKLPKSMPIWLVALPKNGLDYKKELEELKAQISGDYLNRIIIFDTTKKELISIPF CCHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHCEEEEEECCHHHHHHCCH SLRKFFISSSSNIENTKKRLLKRLHINWQSEIEGIRRLQLKDLQRRNQIMVATSVFFSPI HHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCC PSIDVLSMTVLNSLMIKEIKSIWGCNWSPEILDKVSKQIIKTAIAQGVIEWSGQTLLGLT CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHH KLHGPNWLVTGSFQAISAAYLTRVVSSSLADFMAITKGVSEPDLEFIKENSEKIVEKAFE EECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHH KEKINWKSLISDLKNPLMGLT HHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SNISKENLLTDLIKFPKKNIFIILLVLGFGEWFLSDVINFAGGSIGFLILCFGGYFYLK CCCCHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCEEEEE NEKPKFNEPKNLNGWINLCNEDLDFFEEIELNNNLEKENIKRKQSLKSIIYREKKEEIYC CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE IGQNNFDSNNALFINYFKEERYDLNFIEKLPKYNSSEMIPEEILNSDAILYFLKLPLSAN EECCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHCCCEEEEEEECCCCCC DFLWLEKLPKSMPIWLVALPKNGLDYKKELEELKAQISGDYLNRIIIFDTTKKELISIPF CCHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHCEEEEEECCHHHHHHCCH SLRKFFISSSSNIENTKKRLLKRLHINWQSEIEGIRRLQLKDLQRRNQIMVATSVFFSPI HHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCC PSIDVLSMTVLNSLMIKEIKSIWGCNWSPEILDKVSKQIIKTAIAQGVIEWSGQTLLGLT CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHH KLHGPNWLVTGSFQAISAAYLTRVVSSSLADFMAITKGVSEPDLEFIKENSEKIVEKAFE EECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHH KEKINWKSLISDLKNPLMGLT HHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA