Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123965882

Identifier: 123965882

GI number: 123965882

Start: 577964

End: 578848

Strand: Reverse

Name: 123965882

Synonym: P9515_06471

Alternate gene names: NA

Gene position: 578848-577964 (Counterclockwise)

Preceding gene: 123965883

Following gene: 123965881

Centisome position: 33.97

GC content: 28.47

Gene sequence:

>885_bases
ATGGTTAGAAATAAAAATAAATTATCACTATCCATCCAGAAAAACAAAAGAATTAAATTGCTCATATGTGATATTCGAGA
ATGCAATAAATTCAGTAAAGAAATTAGTCAAATAAATTTTCTTATACACACTGCCACAGCTTGGGGTGATCCGAAAAGAG
CCTATGAAGTAAATATAAAAGCGTTTGAAGAGTTATTGGGAATGCTTGAAAAAAATAAATTAGAAAAAATAATTTATTTT
TCAACAGCGAGCATACTTAATCAAGAAACTGAATTAATGAGAGAATCCTTAACTTATGGAACAGAATACATTCAAACAAA
ATATGAGTGTTTTCAAAGACTTAGAGAGAGCTCTTTTGCAGAAAAAACATTTGCAGTTTTCCCTACTCTAGTTTTTGGTG
GAACTCTTAATAAAAGAAGTAAGTATCCAACAAGCTATCTAACCAGCGGTTTGTTAGAAATAAATAAATGGCTCTGGTTA
GCAAGATTTCTAAAACTTAACTCAAAATTTCACTTTATACATGCCAATGACATTGCACAAATTTGTGGCTTTCTAATAAA
AAATCATAAAGAAGATGCCTATAAAGGTTTCAAGAAATTTGTATTAGGTCAAAACTATATTTCAATTGATGATGCGATTA
ATATCCTTTTAAAAAGGAATCGAATGAATAGATATTTTTCTATAACTCTAACAAAAAAAATAATGAAAATATTATTAAGA
ATACTTCCTATTCAAGCAACTCCATGGGATAGCTTCAGTATTAAAAAATATGACTTCAATCATCATCCAGTGACTAATCC
AGAGACATTTAAGCTAAAAAGTCATGCTAAATCACTGAATGATATTTTAAGGTTAGCTAAATTACCAAGCTGTAATATCA
ATTAA

Upstream 100 bases:

>100_bases
TTTGGCAACTAAAAACTTATTAATAACAGGCTCTAACGGATGTGTTGGTCAATATTTAATTGATTGGTTTTTAAAAAATA
CTCGATTTAGGCTTTATCTC

Downstream 100 bases:

>100_bases
ACTTCTCGCGATTTAGTTACCAAACCCTTGTAATATAGTTATATAGTTAATTTAAATTATGCTACGTTCATTTTTTACAG
GCTTATTCGCAATAGTTCTA

Product: nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerases

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MVRNKNKLSLSIQKNKRIKLLICDIRECNKFSKEISQINFLIHTATAWGDPKRAYEVNIKAFEELLGMLEKNKLEKIIYF
STASILNQETELMRESLTYGTEYIQTKYECFQRLRESSFAEKTFAVFPTLVFGGTLNKRSKYPTSYLTSGLLEINKWLWL
ARFLKLNSKFHFIHANDIAQICGFLIKNHKEDAYKGFKKFVLGQNYISIDDAINILLKRNRMNRYFSITLTKKIMKILLR
ILPIQATPWDSFSIKKYDFNHHPVTNPETFKLKSHAKSLNDILRLAKLPSCNIN

Sequences:

>Translated_294_residues
MVRNKNKLSLSIQKNKRIKLLICDIRECNKFSKEISQINFLIHTATAWGDPKRAYEVNIKAFEELLGMLEKNKLEKIIYF
STASILNQETELMRESLTYGTEYIQTKYECFQRLRESSFAEKTFAVFPTLVFGGTLNKRSKYPTSYLTSGLLEINKWLWL
ARFLKLNSKFHFIHANDIAQICGFLIKNHKEDAYKGFKKFVLGQNYISIDDAINILLKRNRMNRYFSITLTKKIMKILLR
ILPIQATPWDSFSIKKYDFNHHPVTNPETFKLKSHAKSLNDILRLAKLPSCNIN
>Mature_294_residues
MVRNKNKLSLSIQKNKRIKLLICDIRECNKFSKEISQINFLIHTATAWGDPKRAYEVNIKAFEELLGMLEKNKLEKIIYF
STASILNQETELMRESLTYGTEYIQTKYECFQRLRESSFAEKTFAVFPTLVFGGTLNKRSKYPTSYLTSGLLEINKWLWL
ARFLKLNSKFHFIHANDIAQICGFLIKNHKEDAYKGFKKFVLGQNYISIDDAINILLKRNRMNRYFSITLTKKIMKILLR
ILPIQATPWDSFSIKKYDFNHHPVTNPETFKLKSHAKSLNDILRLAKLPSCNIN

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34451; Mature: 34451

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRNKNKLSLSIQKNKRIKLLICDIRECNKFSKEISQINFLIHTATAWGDPKRAYEVNIK
CCCCCCEEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECHH
AFEELLGMLEKNKLEKIIYFSTASILNQETELMRESLTYGTEYIQTKYECFQRLRESSFA
HHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKTFAVFPTLVFGGTLNKRSKYPTSYLTSGLLEINKWLWLARFLKLNSKFHFIHANDIAQ
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHH
ICGFLIKNHKEDAYKGFKKFVLGQNYISIDDAINILLKRNRMNRYFSITLTKKIMKILLR
HHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
ILPIQATPWDSFSIKKYDFNHHPVTNPETFKLKSHAKSLNDILRLAKLPSCNIN
HHCCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVRNKNKLSLSIQKNKRIKLLICDIRECNKFSKEISQINFLIHTATAWGDPKRAYEVNIK
CCCCCCEEEEEEECCCEEEEEEECHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECHH
AFEELLGMLEKNKLEKIIYFSTASILNQETELMRESLTYGTEYIQTKYECFQRLRESSFA
HHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKTFAVFPTLVFGGTLNKRSKYPTSYLTSGLLEINKWLWLARFLKLNSKFHFIHANDIAQ
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHH
ICGFLIKNHKEDAYKGFKKFVLGQNYISIDDAINILLKRNRMNRYFSITLTKKIMKILLR
HHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
ILPIQATPWDSFSIKKYDFNHHPVTNPETFKLKSHAKSLNDILRLAKLPSCNIN
HHCCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA