| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965846
Identifier: 123965846
GI number: 123965846
Start: 547532
End: 548302
Strand: Direct
Name: 123965846
Synonym: P9515_06111
Alternate gene names: NA
Gene position: 547532-548302 (Clockwise)
Preceding gene: 123965841
Following gene: 123965848
Centisome position: 32.13
GC content: 39.82
Gene sequence:
>771_bases ATGGAACCAACTTCTAGCCTAAATAGAGGAGAATCAAAAAAAGGAAGCTCTCTTGTAACGGGGTCTGAAGTTCAATCTCA GGCCAATGGAGCAAGTTGTTTTATTACAACTGACTCTGAAAAGTCATTAGTTTCTAGACAAGCAAGTCAAGTTGAGCAAA TAGAACTAAGGACGTATGTCTTTTTAGACTCCCTTCAACCTCAGTTATCCGCATATATGGGAACTGTAAGTAGAGGCTTT TTACCAATACCTGGCGATTCTTGCTTATGGATGGAGGTGTCTCCAGGAATGGCCGTTCATAGAGTTACTGATATTGCTTT AAAAGCAAGCAATGTAAGACTAGGCCAAATGATTGTTGAAAGAGCCTTTGGTTCTTTAGCTCTTTATCACAAGGACCAAA GTACGGTTTTGCATTCAGGAGATGTAGTTTTAGATGCGATTGGTAGTGAAGTAAGGAAAAGAACAAAACCATCTACAAGC TGGACAGAAGTTATCCGTGCAATTACTCCAGACCATGCAGTTTTAATAAATAGGCAAAACAGAAGTGGATCTATGATTCA ATCTGGAATGAGCATGTTTATTTTGGAGACTGAACCCGCAGGATATGTACTGAAGGCTGCTAATGAAGCTGAAAAATCTT CAAATATAACTATCGTTGATGTAAAGGCTGTCGGAGCTTTTGGAAGGTTAACTCTTGCAGGGAAAGAGGGAGATGTCGAG GAGGCTGCAGCAGCTGCAATAAGAGCTATCGAGCAAATATCAAATAATTAA
Upstream 100 bases:
>100_bases CATAGAATTACATATCTTTAATTTGAAGTTATCGGTTTGTGCGAAGCATGCAAGTTAATTTAATAGAAAAAAAGAACCTT AATCCGTTATAGTCTCCTGA
Downstream 100 bases:
>100_bases ATAGGTTTTTTAAATAATTCCAAATTCTTTTTTCAAAAAAGGAGATATATTTTTTGCTGCTTTGCCTCTACTTCCAAGTT TAATTAATTGAGAATGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: Bacterial Microcompartments Protein Family; Microcompartments Protein Family Protein
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MEPTSSLNRGESKKGSSLVTGSEVQSQANGASCFITTDSEKSLVSRQASQVEQIELRTYVFLDSLQPQLSAYMGTVSRGF LPIPGDSCLWMEVSPGMAVHRVTDIALKASNVRLGQMIVERAFGSLALYHKDQSTVLHSGDVVLDAIGSEVRKRTKPSTS WTEVIRAITPDHAVLINRQNRSGSMIQSGMSMFILETEPAGYVLKAANEAEKSSNITIVDVKAVGAFGRLTLAGKEGDVE EAAAAAIRAIEQISNN
Sequences:
>Translated_256_residues MEPTSSLNRGESKKGSSLVTGSEVQSQANGASCFITTDSEKSLVSRQASQVEQIELRTYVFLDSLQPQLSAYMGTVSRGF LPIPGDSCLWMEVSPGMAVHRVTDIALKASNVRLGQMIVERAFGSLALYHKDQSTVLHSGDVVLDAIGSEVRKRTKPSTS WTEVIRAITPDHAVLINRQNRSGSMIQSGMSMFILETEPAGYVLKAANEAEKSSNITIVDVKAVGAFGRLTLAGKEGDVE EAAAAAIRAIEQISNN >Mature_256_residues MEPTSSLNRGESKKGSSLVTGSEVQSQANGASCFITTDSEKSLVSRQASQVEQIELRTYVFLDSLQPQLSAYMGTVSRGF LPIPGDSCLWMEVSPGMAVHRVTDIALKASNVRLGQMIVERAFGSLALYHKDQSTVLHSGDVVLDAIGSEVRKRTKPSTS WTEVIRAITPDHAVLINRQNRSGSMIQSGMSMFILETEPAGYVLKAANEAEKSSNITIVDVKAVGAFGRLTLAGKEGDVE EAAAAAIRAIEQISNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27475; Mature: 27475
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPTSSLNRGESKKGSSLVTGSEVQSQANGASCFITTDSEKSLVSRQASQVEQIELRTYV CCCCCCCCCCCCCCCCCEEECHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHEE FLDSLQPQLSAYMGTVSRGFLPIPGDSCLWMEVSPGMAVHRVTDIALKASNVRLGQMIVE EECCCCHHHHHHHHHHHCCCEECCCCCEEEEEECCCCCHHHHHHHEEEECCCHHHHHHHH RAFGSLALYHKDQSTVLHSGDVVLDAIGSEVRKRTKPSTSWTEVIRAITPDHAVLINRQN HHHCCEEEEECCCCCEEECCCEEEEHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCC RSGSMIQSGMSMFILETEPAGYVLKAANEAEKSSNITIVDVKAVGAFGRLTLAGKEGDVE CCCHHHHCCCEEEEEEECCCCEEEECCCCHHHCCCEEEEEEEECCCCEEEEEECCCCCHH EAAAAAIRAIEQISNN HHHHHHHHHHHHHHCC >Mature Secondary Structure MEPTSSLNRGESKKGSSLVTGSEVQSQANGASCFITTDSEKSLVSRQASQVEQIELRTYV CCCCCCCCCCCCCCCCCEEECHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHEE FLDSLQPQLSAYMGTVSRGFLPIPGDSCLWMEVSPGMAVHRVTDIALKASNVRLGQMIVE EECCCCHHHHHHHHHHHCCCEECCCCCEEEEEECCCCCHHHHHHHEEEECCCHHHHHHHH RAFGSLALYHKDQSTVLHSGDVVLDAIGSEVRKRTKPSTSWTEVIRAITPDHAVLINRQN HHHCCEEEEECCCCCEEECCCEEEEHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCC RSGSMIQSGMSMFILETEPAGYVLKAANEAEKSSNITIVDVKAVGAFGRLTLAGKEGDVE CCCHHHHCCCEEEEEEECCCCEEEECCCCHHHCCCEEEEEEEECCCCEEEEEECCCCCHH EAAAAAIRAIEQISNN HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA