| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965845
Identifier: 123965845
GI number: 123965845
Start: 547066
End: 547434
Strand: Reverse
Name: 123965845
Synonym: P9515_06101
Alternate gene names: NA
Gene position: 547434-547066 (Counterclockwise)
Preceding gene: 123965847
Following gene: 123965844
Centisome position: 32.12
GC content: 33.88
Gene sequence:
>369_bases ATGGTAACTTCTCAAAAAAAAGAACCAGATTCTTCTTCCTCTAAAAATGAATTAAGCCCTGATCAAACCCTCGGATTAGT AAGCTTAAGTTTAATGCAAAAGTTATCTCAAAAAGATCCCTCATTTAGTTGGTTAGTAGATACGAAACCAGATCAAATAA ATGTTAAAAAGCTTAGAGACAGATTAGAGTTAACGGAATTAGCAATTAACACAGGTGCACCTCTTTCAACTACTGAAGTT TCAATTTTAATGGGTGCAAAGCCTGGTAAATCAAAGATAGAAAGAGGTGGATTATTAGCCACCAAAATTGCTAGAAATGT ATGGAAATTATCTAAAATAGGCCAAGGAAGCTCTTATTACAGGAACTGA
Upstream 100 bases:
>100_bases CATTCAGGAGACTATAACGGATTAAGGTTCTTTTTTTCTATTAAATTAACTTGCATGCTTCGCACAAACCGATAACTTCA AATTAAAGATATGTAATTCT
Downstream 100 bases:
>100_bases AATTTTAATAAAAAGAATTAGTTTTATTATTCTTATTAAAGTTTTAAAACATTCATATAAGTTTTTTAAATGTATACATT TTGTAAGAGAACTTATCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MVTSQKKEPDSSSSKNELSPDQTLGLVSLSLMQKLSQKDPSFSWLVDTKPDQINVKKLRDRLELTELAINTGAPLSTTEV SILMGAKPGKSKIERGGLLATKIARNVWKLSKIGQGSSYYRN
Sequences:
>Translated_122_residues MVTSQKKEPDSSSSKNELSPDQTLGLVSLSLMQKLSQKDPSFSWLVDTKPDQINVKKLRDRLELTELAINTGAPLSTTEV SILMGAKPGKSKIERGGLLATKIARNVWKLSKIGQGSSYYRN >Mature_122_residues MVTSQKKEPDSSSSKNELSPDQTLGLVSLSLMQKLSQKDPSFSWLVDTKPDQINVKKLRDRLELTELAINTGAPLSTTEV SILMGAKPGKSKIERGGLLATKIARNVWKLSKIGQGSSYYRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13406; Mature: 13406
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSQKKEPDSSSSKNELSPDQTLGLVSLSLMQKLSQKDPSFSWLVDTKPDQINVKKLRD CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH RLELTELAINTGAPLSTTEVSILMGAKPGKSKIERGGLLATKIARNVWKLSKIGQGSSYY HHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC RN CC >Mature Secondary Structure MVTSQKKEPDSSSSKNELSPDQTLGLVSLSLMQKLSQKDPSFSWLVDTKPDQINVKKLRD CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH RLELTELAINTGAPLSTTEVSILMGAKPGKSKIERGGLLATKIARNVWKLSKIGQGSSYY HHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC RN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA