Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is yajQ [C]

Identifier: 123965779

GI number: 123965779

Start: 485397

End: 485894

Strand: Direct

Name: yajQ [C]

Synonym: P9515_05441

Alternate gene names: 123965779

Gene position: 485397-485894 (Clockwise)

Preceding gene: 123965778

Following gene: 123965780

Centisome position: 28.48

GC content: 27.71

Gene sequence:

>498_bases
ATGGCAGAAAATTTTTCGTTTGATGTGGTTTCCGATTTCGATAGACAAGAATTGGTAAATGCTTTGGATCAAGTCAAAAG
GGAAATTTCTCAAAGATATGATCTAAAAGGAACAGAAACCATATTGGAGTTAGAAAAAGAAAATATTTTTATAACTACAA
ATAGCGAATTAACTCTAAATTCTGTAATCGATATTATTAGACAAAAGGCAATAAAAAGAAAACTATCTTTAAAAATCTTT
GAATACAAGAGTATTGAAGCTGTAAGCGGAAATAAAGTAAAGCAAACTATAACTTTAAAGAAAGGACTTAATCAGGAAAT
TGCGAAAAAAATAAGTAAAAATTTGAGAGATGAAATTAAAAAGATCAATGTAAGTATTAATGGAGAAACATTGAGAGTAA
TGAGCAAAAGCAAGAATGATCTTCAATTGGCAATAAAGTTACTTGAAAATTTGGAGGAGACATATAAAATTCCTCTACAA
GCAAATAATTATCGATAA

Upstream 100 bases:

>100_bases
GGGTAAGGTAGTTAGTTTGTTATTTTTTGATTAAATAAACTTTTTTTTTATTTTTTTTACTTTATTTGGAGTAATAATAA
AATTAATTTAAATTTGAGTA

Downstream 100 bases:

>100_bases
CATGTTAATAATTAAAATCTTACAATGTCAGACTATACAAAATCACTTATTGAATCATTGAGCCTAAAAATAAAAGATTA
TCCACGCTTTTCTTTAACAG

Product: putative nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MAENFSFDVVSDFDRQELVNALDQVKREISQRYDLKGTETILELEKENIFITTNSELTLNSVIDIIRQKAIKRKLSLKIF
EYKSIEAVSGNKVKQTITLKKGLNQEIAKKISKNLRDEIKKINVSINGETLRVMSKSKNDLQLAIKLLENLEETYKIPLQ
ANNYR

Sequences:

>Translated_165_residues
MAENFSFDVVSDFDRQELVNALDQVKREISQRYDLKGTETILELEKENIFITTNSELTLNSVIDIIRQKAIKRKLSLKIF
EYKSIEAVSGNKVKQTITLKKGLNQEIAKKISKNLRDEIKKINVSINGETLRVMSKSKNDLQLAIKLLENLEETYKIPLQ
ANNYR
>Mature_164_residues
AENFSFDVVSDFDRQELVNALDQVKREISQRYDLKGTETILELEKENIFITTNSELTLNSVIDIIRQKAIKRKLSLKIFE
YKSIEAVSGNKVKQTITLKKGLNQEIAKKISKNLRDEIKKINVSINGETLRVMSKSKNDLQLAIKLLENLEETYKIPLQA
NNYR

Specific function: Unknown

COG id: COG1666

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0234 family [H]

Homologues:

Organism=Escherichia coli, GI87081737, Length=162, Percent_Identity=31.4814814814815, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007551 [H]

Pfam domain/function: PF04461 DUF520 [H]

EC number: NA

Molecular weight: Translated: 19076; Mature: 18945

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAENFSFDVVSDFDRQELVNALDQVKREISQRYDLKGTETILELEKENIFITTNSELTLN
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHEECCCEEEEEECCCEEHH
SVIDIIRQKAIKRKLSLKIFEYKSIEAVSGNKVKQTITLKKGLNQEIAKKISKNLRDEIK
HHHHHHHHHHHHHHHHHEEEECCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KINVSINGETLRVMSKSKNDLQLAIKLLENLEETYKIPLQANNYR
HEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AENFSFDVVSDFDRQELVNALDQVKREISQRYDLKGTETILELEKENIFITTNSELTLN
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHEECCCEEEEEECCCEEHH
SVIDIIRQKAIKRKLSLKIFEYKSIEAVSGNKVKQTITLKKGLNQEIAKKISKNLRDEIK
HHHHHHHHHHHHHHHHHEEEECCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KINVSINGETLRVMSKSKNDLQLAIKLLENLEETYKIPLQANNYR
HEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]