| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965738
Identifier: 123965738
GI number: 123965738
Start: 451040
End: 452182
Strand: Reverse
Name: 123965738
Synonym: P9515_05031
Alternate gene names: NA
Gene position: 452182-451040 (Counterclockwise)
Preceding gene: 123965740
Following gene: 123965732
Centisome position: 26.53
GC content: 30.8
Gene sequence:
>1143_bases ATGATTATTGATTCTCAGAAAAGATTATTTGGCAAAGGTTGCAATGTAAGTTTATTTACTTTAGGCACAATGCGAGCGAC TGAAAATCTTAATAAAATGTACTCTCTGATAAAAAGGGCTCATCAAGCGGGCATTAATCATTTAGAAACAGCTGCATCTT ATGGAAAAGCAGAAATCCTGATAGGGGAAGTATTAAATAAGTTAGAAAATTCCGAAAAAATAACGAAGAAAGAATGGATA ATTACTACTAAAGTTTTACCTAAAGGAGATTTTAATTATCTAAAAAAAAATTTCAAAAATTCTCTAAAAAATTTAAAGCT AAAAAAAATTCATAATCTTGCTATTCATGGAATAAATTTAGATGAGCATTTGGATTGGGTTTTAAATGGAGAGGGGGTAA AGTTTTTACAGTGGTTAATTAAGAATGACCTAGTTGATCAAGTTGGTTTTAGTTCGCATGGAAGTTATAAACTTATTGAA AAAGCAATTAATTGTGAAGTATTTAGTTTTTGCAATCTTCATTTACATTTTTTAGATCAATCGAAGATAAGCCTTGCCCA GTTAGCTTTAAAAAAGAAAATGGGTGTTTTAGCTATATCCCCTGCTGATAAAGGCGGAAGATTATATGCACCAAGTGATA CTTTATTAAAAGCATCTGCACCATACCATCCTTTAGCACTGGCTTATAGATTTTTACTTTCAAAAGGAATTACAACTCTA TCTTTAGGAGCTTCAAAAATTGAAGATTTTTATATTGCAGAAAAACTTATTAATTCAAGTCAAAAACTTACTTCTTCTGA AATTAATGCATTAAAAAATATCGAAAAGGTCGCTAATGAAGAATTAAAGTCCTCAAAATGTGAGCAATGTAGATCTTGCC TTCCATGCCCAAGTGAAATCCCTATACCTGAAATACTTCGTTTAAGAAATATCTCTTTAGGTTATGGCCAGATAGAGTTT GCTAAAGAAAGATATAATTTAATAGGTAGAGCTGGCCACTGGTGGGAAGAGAAAAATGCCTCTTTTTGTTTAGAGTGTAA TGAATGCGTTCCAAAATGTCCAAGTGAATTAAATATTCCAGAATTATTAAAACAAACTCACAACCTATTAGTTGAAAAGC CTAAAAAAAGATTATGGGGTTGA
Upstream 100 bases:
>100_bases AAGATTTTTTTTAGAATAAATATTAATTTTAATTTACTTTAAACCAATATCAACTATAAATAAATAAAAGAATTATTTAG TAGAAATTAATTATATAAAG
Downstream 100 bases:
>100_bases AGATTGATTCCATAAATTTTCCAAATTAGATTTTTCTTTTTTATTAATAGGAGGCAAAGACCAACTATTTTCCCAACAAA TTTTTGATGGGCCAGAATTA
Product: aldo/keto reductase
Products: NA
Alternate protein names: Oxidoreductase; Aldo/Keto Reductase Family Oxidoreductase; Aldo/Keto Reductase Family Protein; Oxidoreductase Aldo/Keto Reductase Family; Oxidoreductase Aldo/Keto Reductase Family Protein; Aldo/Keto Reductase Ferredoxin Subunit; Oxidoreductase Of Aldo/Keto Reductase Family; Oxidoreductase Aldo/Keto Reductase; Aldo/Keto Reductase Family
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MIIDSQKRLFGKGCNVSLFTLGTMRATENLNKMYSLIKRAHQAGINHLETAASYGKAEILIGEVLNKLENSEKITKKEWI ITTKVLPKGDFNYLKKNFKNSLKNLKLKKIHNLAIHGINLDEHLDWVLNGEGVKFLQWLIKNDLVDQVGFSSHGSYKLIE KAINCEVFSFCNLHLHFLDQSKISLAQLALKKKMGVLAISPADKGGRLYAPSDTLLKASAPYHPLALAYRFLLSKGITTL SLGASKIEDFYIAEKLINSSQKLTSSEINALKNIEKVANEELKSSKCEQCRSCLPCPSEIPIPEILRLRNISLGYGQIEF AKERYNLIGRAGHWWEEKNASFCLECNECVPKCPSELNIPELLKQTHNLLVEKPKKRLWG
Sequences:
>Translated_380_residues MIIDSQKRLFGKGCNVSLFTLGTMRATENLNKMYSLIKRAHQAGINHLETAASYGKAEILIGEVLNKLENSEKITKKEWI ITTKVLPKGDFNYLKKNFKNSLKNLKLKKIHNLAIHGINLDEHLDWVLNGEGVKFLQWLIKNDLVDQVGFSSHGSYKLIE KAINCEVFSFCNLHLHFLDQSKISLAQLALKKKMGVLAISPADKGGRLYAPSDTLLKASAPYHPLALAYRFLLSKGITTL SLGASKIEDFYIAEKLINSSQKLTSSEINALKNIEKVANEELKSSKCEQCRSCLPCPSEIPIPEILRLRNISLGYGQIEF AKERYNLIGRAGHWWEEKNASFCLECNECVPKCPSELNIPELLKQTHNLLVEKPKKRLWG >Mature_380_residues MIIDSQKRLFGKGCNVSLFTLGTMRATENLNKMYSLIKRAHQAGINHLETAASYGKAEILIGEVLNKLENSEKITKKEWI ITTKVLPKGDFNYLKKNFKNSLKNLKLKKIHNLAIHGINLDEHLDWVLNGEGVKFLQWLIKNDLVDQVGFSSHGSYKLIE KAINCEVFSFCNLHLHFLDQSKISLAQLALKKKMGVLAISPADKGGRLYAPSDTLLKASAPYHPLALAYRFLLSKGITTL SLGASKIEDFYIAEKLINSSQKLTSSEINALKNIEKVANEELKSSKCEQCRSCLPCPSEIPIPEILRLRNISLGYGQIEF AKERYNLIGRAGHWWEEKNASFCLECNECVPKCPSELNIPELLKQTHNLLVEKPKKRLWG
Specific function: Unknown
COG id: COG1453
COG function: function code R; Predicted oxidoreductases of the aldo/keto reductase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42879; Mature: 42879
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDSQKRLFGKGCNVSLFTLGTMRATENLNKMYSLIKRAHQAGINHLETAASYGKAEIL CCCCCCHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHH IGEVLNKLENSEKITKKEWIITTKVLPKGDFNYLKKNFKNSLKNLKLKKIHNLAIHGINL HHHHHHHHHCCHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHEECCCH DEHLDWVLNGEGVKFLQWLIKNDLVDQVGFSSHGSYKLIEKAINCEVFSFCNLHLHFLDQ HHHCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHCEEEEECCC SKISLAQLALKKKMGVLAISPADKGGRLYAPSDTLLKASAPYHPLALAYRFLLSKGITTL CHHHHHHHHHHHHCCEEEECCCCCCCEEECCCCCEEECCCCCCHHHHHHHHHHHCCCCEE SLGASKIEDFYIAEKLINSSQKLTSSEINALKNIEKVANEELKSSKCEQCRSCLPCPSEI ECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PIPEILRLRNISLGYGQIEFAKERYNLIGRAGHWWEEKNASFCLECNECVPKCPSELNIP CHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHCCCCCCCCCHH ELLKQTHNLLVEKPKKRLWG HHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure MIIDSQKRLFGKGCNVSLFTLGTMRATENLNKMYSLIKRAHQAGINHLETAASYGKAEIL CCCCCCHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHH IGEVLNKLENSEKITKKEWIITTKVLPKGDFNYLKKNFKNSLKNLKLKKIHNLAIHGINL HHHHHHHHHCCHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHEECCCH DEHLDWVLNGEGVKFLQWLIKNDLVDQVGFSSHGSYKLIEKAINCEVFSFCNLHLHFLDQ HHHCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHCEEEEECCC SKISLAQLALKKKMGVLAISPADKGGRLYAPSDTLLKASAPYHPLALAYRFLLSKGITTL CHHHHHHHHHHHHCCEEEECCCCCCCEEECCCCCEEECCCCCCHHHHHHHHHHHCCCCEE SLGASKIEDFYIAEKLINSSQKLTSSEINALKNIEKVANEELKSSKCEQCRSCLPCPSEI ECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PIPEILRLRNISLGYGQIEFAKERYNLIGRAGHWWEEKNASFCLECNECVPKCPSELNIP CHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHCCCCCCCCCHH ELLKQTHNLLVEKPKKRLWG HHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA