| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965737
Identifier: 123965737
GI number: 123965737
Start: 450053
End: 451051
Strand: Direct
Name: 123965737
Synonym: P9515_05021
Alternate gene names: NA
Gene position: 450053-451051 (Clockwise)
Preceding gene: 123965736
Following gene: 123965739
Centisome position: 26.41
GC content: 24.12
Gene sequence:
>999_bases ATGCTTAAAAATTATTCAACAAGAAGGGAATTTCTTAACTATGGAAAACTATCGCTTCTTTTATTACTAAATTCATGTAG TAATTCCTCAAGAAAAATAAGTATTTCTTTACAAAGCTCTTTTTATCCTCAATCTTTAAAAGATACTTTGCCTAAGAGTT GGGAAAAAGAAATTATTAATTTGAGTAAGCTTGACTTAATAAAAAATAAAAAATTATCTAATTCTGATTATATGTTGATT AATGATGGATGGATAAACAGTTTAAATTTTGAAAACTTTCAGAGTTTAAATAATTTATTTAATAATGATAGATTAGATAA TAGGTCTAAAGAATTTCTAAATGATTTTAAAGAATATCAAAGTAATAAATTATTTCCAATAGGTGTAGTTCCATATGCAG TAGTTATAAAAAATAATAAAAATTTAATTAGTGATGCAAGTCAGTCATGGGATTTCCTTCTCGCTGAAAAGTTGAAAGGA AAAATTATATTTCCTCAAAGTCCGAGAATAATAATGTCTATTTTAAAAAAAATTAATGCTAAAAATTCTTTTAGCAAACT TAAAAATCAAGTAATGTTATTTGATGATCAAAATTCAATAAATTGGTTAATTAATTCTCAGGCAACTGTTGCTATTGTTC CATATTCTCAATGTGTAAAATATCTCAAATTTGATTCAAGACTTTCTATTGTTTTTCCTAATAAAGGTGTTCCTTTAATT TGGTATTTCCTTTTAAGTAAATCAAAAGTTAATAATCAAATTTTAATTGATTGGATTAAATCTTTTGAAAATAGGAAAAC TATCGACTTATTGGCAAATGAAGGTTGGTACCTACCTTTTAATGATGAATATTCTCAAAATAAATATAATATCAATTCTA AATATAATAATTCTGGCCCATCAAAAATTTGTTGGGAAAATAGTTGGTCTTTGCCTCCTATTAATAAAAAAGAAAAATCT AATTTGGAAAATTTATGGAATCAATCTTCAACCCCATAA
Upstream 100 bases:
>100_bases TCTTAAGGGTTTTAGCAATGAAGAAATAGTTTCTATGTGTCAAATTAATCTAGAAAGGATGAAGAAGTTAGGTCAAATTT CTTTAGAGGAAAATTTATAA
Downstream 100 bases:
>100_bases TCTTTTTTTAGGCTTTTCAACTAATAGGTTGTGAGTTTGTTTTAATAATTCTGGAATATTTAATTCACTTGGACATTTTG GAACGCATTCATTACACTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MLKNYSTRREFLNYGKLSLLLLLNSCSNSSRKISISLQSSFYPQSLKDTLPKSWEKEIINLSKLDLIKNKKLSNSDYMLI NDGWINSLNFENFQSLNNLFNNDRLDNRSKEFLNDFKEYQSNKLFPIGVVPYAVVIKNNKNLISDASQSWDFLLAEKLKG KIIFPQSPRIIMSILKKINAKNSFSKLKNQVMLFDDQNSINWLINSQATVAIVPYSQCVKYLKFDSRLSIVFPNKGVPLI WYFLLSKSKVNNQILIDWIKSFENRKTIDLLANEGWYLPFNDEYSQNKYNINSKYNNSGPSKICWENSWSLPPINKKEKS NLENLWNQSSTP
Sequences:
>Translated_332_residues MLKNYSTRREFLNYGKLSLLLLLNSCSNSSRKISISLQSSFYPQSLKDTLPKSWEKEIINLSKLDLIKNKKLSNSDYMLI NDGWINSLNFENFQSLNNLFNNDRLDNRSKEFLNDFKEYQSNKLFPIGVVPYAVVIKNNKNLISDASQSWDFLLAEKLKG KIIFPQSPRIIMSILKKINAKNSFSKLKNQVMLFDDQNSINWLINSQATVAIVPYSQCVKYLKFDSRLSIVFPNKGVPLI WYFLLSKSKVNNQILIDWIKSFENRKTIDLLANEGWYLPFNDEYSQNKYNINSKYNNSGPSKICWENSWSLPPINKKEKS NLENLWNQSSTP >Mature_332_residues MLKNYSTRREFLNYGKLSLLLLLNSCSNSSRKISISLQSSFYPQSLKDTLPKSWEKEIINLSKLDLIKNKKLSNSDYMLI NDGWINSLNFENFQSLNNLFNNDRLDNRSKEFLNDFKEYQSNKLFPIGVVPYAVVIKNNKNLISDASQSWDFLLAEKLKG KIIFPQSPRIIMSILKKINAKNSFSKLKNQVMLFDDQNSINWLINSQATVAIVPYSQCVKYLKFDSRLSIVFPNKGVPLI WYFLLSKSKVNNQILIDWIKSFENRKTIDLLANEGWYLPFNDEYSQNKYNINSKYNNSGPSKICWENSWSLPPINKKEKS NLENLWNQSSTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38697; Mature: 38697
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNYSTRREFLNYGKLSLLLLLNSCSNSSRKISISLQSSFYPQSLKDTLPKSWEKEIIN CCCCCHHHHHHHHCCCCEEEHHHHHCCCCCEEEEEEECCCCCCHHHHHHCCHHHHHHHHH LSKLDLIKNKKLSNSDYMLINDGWINSLNFENFQSLNNLFNNDRLDNRSKEFLNDFKEYQ HHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH SNKLFPIGVVPYAVVIKNNKNLISDASQSWDFLLAEKLKGKIIFPQSPRIIMSILKKINA CCCEEEEECCCEEEEEECCCCHHHCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHCC KNSFSKLKNQVMLFDDQNSINWLINSQATVAIVPYSQCVKYLKFDSRLSIVFPNKGVPLI CHHHHHHHCCEEEEECCCCEEEEEECCCEEEEECHHHHHHHHHCCCEEEEEECCCCCCEE WYFLLSKSKVNNQILIDWIKSFENRKTIDLLANEGWYLPFNDEYSQNKYNINSKYNNSGP HEEHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCEEECCCCCCCCCC SKICWENSWSLPPINKKEKSNLENLWNQSSTP CCEEECCCCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MLKNYSTRREFLNYGKLSLLLLLNSCSNSSRKISISLQSSFYPQSLKDTLPKSWEKEIIN CCCCCHHHHHHHHCCCCEEEHHHHHCCCCCEEEEEEECCCCCCHHHHHHCCHHHHHHHHH LSKLDLIKNKKLSNSDYMLINDGWINSLNFENFQSLNNLFNNDRLDNRSKEFLNDFKEYQ HHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH SNKLFPIGVVPYAVVIKNNKNLISDASQSWDFLLAEKLKGKIIFPQSPRIIMSILKKINA CCCEEEEECCCEEEEEECCCCHHHCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHCC KNSFSKLKNQVMLFDDQNSINWLINSQATVAIVPYSQCVKYLKFDSRLSIVFPNKGVPLI CHHHHHHHCCEEEEECCCCEEEEEECCCEEEEECHHHHHHHHHCCCEEEEEECCCCCCEE WYFLLSKSKVNNQILIDWIKSFENRKTIDLLANEGWYLPFNDEYSQNKYNINSKYNNSGP HEEHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCEEECCCCCCCCCC SKICWENSWSLPPINKKEKSNLENLWNQSSTP CCEEECCCCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA