| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is 123965690
Identifier: 123965690
GI number: 123965690
Start: 405266
End: 405532
Strand: Direct
Name: 123965690
Synonym: P9515_04551
Alternate gene names: NA
Gene position: 405266-405532 (Clockwise)
Preceding gene: 123965689
Following gene: 123965691
Centisome position: 23.78
GC content: 28.46
Gene sequence:
>267_bases TTGAGTTCAGAGAGTTATTTAAATCATCCAACATTTGGAATGCTATATCAAGTTTCTCCTGGAAATGAGGGGAAGTATAT TTATGCGACTTTGTATGCGCAAAAAATGTTTTTTTTAGTCGAAAATAAAGAACGTGAATTTTCTTTTGAAGTTATACGAT ATTTAGATGCTAGAAATCAGTCTGAATTGAATTTGCAAAGATCTAGAAAAAAAACACCAGAGGATTATCAAAAATGGGAG AATTTATTTAAACAAACTTTTTTATAA
Upstream 100 bases:
>100_bases TCTAACTTTGATTATTAATTCATTATCGATATTTTTTATTTGCGTAGCAATTTTCCTTAGAAAACAGTATGGTGCATTGT AAACATCACAATATTTAAAT
Downstream 100 bases:
>100_bases AATTTGGAAATTTCAAATTACCTACAAATAAAAAAGGAATTACCACTTAATGTCAATTTACTTGCTGTGAGTAAGGGGTT TGGCAGTCAAGATATCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MSSESYLNHPTFGMLYQVSPGNEGKYIYATLYAQKMFFLVENKEREFSFEVIRYLDARNQSELNLQRSRKKTPEDYQKWE NLFKQTFL
Sequences:
>Translated_88_residues MSSESYLNHPTFGMLYQVSPGNEGKYIYATLYAQKMFFLVENKEREFSFEVIRYLDARNQSELNLQRSRKKTPEDYQKWE NLFKQTFL >Mature_87_residues SSESYLNHPTFGMLYQVSPGNEGKYIYATLYAQKMFFLVENKEREFSFEVIRYLDARNQSELNLQRSRKKTPEDYQKWEN LFKQTFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10663; Mature: 10532
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSESYLNHPTFGMLYQVSPGNEGKYIYATLYAQKMFFLVENKEREFSFEVIRYLDARNQ CCCCCCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHEEECCCCCCHHHHHHHHHHCCCC SELNLQRSRKKTPEDYQKWENLFKQTFL CCCCHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SSESYLNHPTFGMLYQVSPGNEGKYIYATLYAQKMFFLVENKEREFSFEVIRYLDARNQ CCCCCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHEEECCCCCCHHHHHHHHHHCCCC SELNLQRSRKKTPEDYQKWENLFKQTFL CCCCHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA