| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965676
Identifier: 123965676
GI number: 123965676
Start: 390943
End: 392997
Strand: Reverse
Name: 123965676
Synonym: P9515_04411
Alternate gene names: NA
Gene position: 392997-390943 (Counterclockwise)
Preceding gene: 123965677
Following gene: 123965675
Centisome position: 23.06
GC content: 31.58
Gene sequence:
>2055_bases ATGAGTATTTTTAATTACTCCAACCCCTGGAATTTTCCAAGCCTTGGCTATGGCAAGGAAAAAGGCCTGAATAATGCAAG TGACATATTTAAGCACTTGGATAACGTTGGGCTTGAGACAGCACAAAATTCAAGAAACTCCTGTATGAAAGATGATAATG GTGAAGATGTTGAGGTATCAGTTGAATATCGATTAAAAAATATAGAAAGTAGATTTTTCCCTGGAATTGAAGACTACAAA AAAAGATTAGAATCTGCAATTGAATATTTTCAAAATAAAGAAGCTTCTTCAGGATCAAACAAACCTATTGGCAAAGAAAT AATACAATTATCAAGAGCTTTGAGAATACTAAATCAAGATACAATTCCTGTTTTAACAATAAGAGATTATGGAACTAAGG GCCTCAAAGGGGGAGAAGATGAAGACTTTGCTCCATATTTTCGTCTTATCAAGTCAACTGGTATAAGTGCTGCTCAAGGT ACAAAAGCTGGACGCTTTGGTCATGGACAAAATGCTTTAGTTGCCAAATCTGATATAAAAGCTTATACATTATTTTCTCA ATTTACTAACGAATACGAAGAAAAGGAAACTTTATTTGCAGGCAACTCAATCTTATGTTCACACATTGATCCAACCCAAA ACTATAAGACTCAAGAAACAGGATTTATAGGTAACGTCATTAACCCGAATAAATTTGTCTCTTATAGAAATAATGATCTT TTAAATATTAACTTTCCTTATGAAAGATCTACTAATGGAACTGATATCTATATTTGGGGTTTTAAACATGAATCTGATAA CTGGGATCTTTTATTGGCTAAGGGATTAATTAAAGGATTCTTTGCTGCAATAAGAGAAAAATTAATTAATTTCAAAATAA TAAACGATAATACAAATGAAATTCTTCATGAAATAAATCATGAAAATTTAGACGAATATTATTCTACTTTGGAAGTCCAA GTTAAAAAGAGACTATCAAGCAAGGCATGGAACAAAGAAATGCAATCTATTTATGGATTTCTAAAAACAACGTGTAACGA GCATTCAATTTCCATAACAGGCAAAAGATCAACTCATCTGATTGATGTTAAAAAAATAGGAAAGGTTGAAATGACCTTAT ATCAAGATAAGGATGATCAAAAGTTAACGAAAGAATGGTGCATAATGAGACAACCTCTTATGAAAATAAGAAATTTCAGT AAACCAATAGGTATTCCTTTTAATGCAGTTGTAAAAGTCTTATCTGATAAAGGTAATGATGTTTTTATGGATTTAGAGGA TCCAACTCATCTCAAATTAGTAAGAGATTATTGTGATGAAGAATATGTAAATGAATATTGGAGTATTTATCAAGATTTAA GTAAAAAAGTTCAAATTATAATAGAAAATCTTGATCCTTTATCTAGTCAAACGCAAGATATACCAGGCCTGGCAGATTTA ATCCCTGATCTTAGAACTGGGATAGGAGATGGTTCATTTTTCTCTTCTCAAGAAGGCATTCCGAATACAAATAATAAGGA AGGATTCAATCCCTCAATAATTACTGATAGCAATAAATCGACTATTACAAGCATTCAAAAAAATTCTTCCTCAATATCAA CTAAAAGAACTGCAAGCAGTCAAGGGACCTCAGGCGGGACTGTAGGCACAGTAAAAACTGACAAAAAAGTTAACCCTCAA GGTGGCAATCCAGGAAGCGGTGCTGGAGATAAACAAGGAAATGCTAAATTTGATCCAAAAGGTAAGAAAGAATCTTTAAC TATTAATGAAGATATAAAAATAAGATTACTAAGAAATTCTTCAACCGAAAATAGATATCTTTTAAGAATAATTGCATTAC AAGATATACATGGAGATATCAATTTAGGAATGGTTGTAAATAATGAAAAAAAGAGCTGCGTGCCCTTACCCGTAGAGTCG AAAATTTCATTTAATAGAAAAGAAATTCAATGGCATGAAAATAAAATTAAAGATATTAAGATGCAGACTAATGAATTTTA TGACTGCGAGATTGTACTCCCAAATTCTGCTGAATTCGCAATTTCCACCATCTAA
Upstream 100 bases:
>100_bases ATCGCAACAAATTAAAAAAGCTCTTAAAGATAAAGTTAACGAGATCTGTAGAAAATTTGATTCCGGTACTAACAACGATT CTTCATTCAAACTTTTATAA
Downstream 100 bases:
>100_bases TGCCTAGCTCAACATCCAAACAAATCTCATATCCATGTCCAGTAATTGGTAATGAAGGTGATTATCAATCAACTGCAAAA ATGGATATTGATTATGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 684; Mature: 683
Protein sequence:
>684_residues MSIFNYSNPWNFPSLGYGKEKGLNNASDIFKHLDNVGLETAQNSRNSCMKDDNGEDVEVSVEYRLKNIESRFFPGIEDYK KRLESAIEYFQNKEASSGSNKPIGKEIIQLSRALRILNQDTIPVLTIRDYGTKGLKGGEDEDFAPYFRLIKSTGISAAQG TKAGRFGHGQNALVAKSDIKAYTLFSQFTNEYEEKETLFAGNSILCSHIDPTQNYKTQETGFIGNVINPNKFVSYRNNDL LNINFPYERSTNGTDIYIWGFKHESDNWDLLLAKGLIKGFFAAIREKLINFKIINDNTNEILHEINHENLDEYYSTLEVQ VKKRLSSKAWNKEMQSIYGFLKTTCNEHSISITGKRSTHLIDVKKIGKVEMTLYQDKDDQKLTKEWCIMRQPLMKIRNFS KPIGIPFNAVVKVLSDKGNDVFMDLEDPTHLKLVRDYCDEEYVNEYWSIYQDLSKKVQIIIENLDPLSSQTQDIPGLADL IPDLRTGIGDGSFFSSQEGIPNTNNKEGFNPSIITDSNKSTITSIQKNSSSISTKRTASSQGTSGGTVGTVKTDKKVNPQ GGNPGSGAGDKQGNAKFDPKGKKESLTINEDIKIRLLRNSSTENRYLLRIIALQDIHGDINLGMVVNNEKKSCVPLPVES KISFNRKEIQWHENKIKDIKMQTNEFYDCEIVLPNSAEFAISTI
Sequences:
>Translated_684_residues MSIFNYSNPWNFPSLGYGKEKGLNNASDIFKHLDNVGLETAQNSRNSCMKDDNGEDVEVSVEYRLKNIESRFFPGIEDYK KRLESAIEYFQNKEASSGSNKPIGKEIIQLSRALRILNQDTIPVLTIRDYGTKGLKGGEDEDFAPYFRLIKSTGISAAQG TKAGRFGHGQNALVAKSDIKAYTLFSQFTNEYEEKETLFAGNSILCSHIDPTQNYKTQETGFIGNVINPNKFVSYRNNDL LNINFPYERSTNGTDIYIWGFKHESDNWDLLLAKGLIKGFFAAIREKLINFKIINDNTNEILHEINHENLDEYYSTLEVQ VKKRLSSKAWNKEMQSIYGFLKTTCNEHSISITGKRSTHLIDVKKIGKVEMTLYQDKDDQKLTKEWCIMRQPLMKIRNFS KPIGIPFNAVVKVLSDKGNDVFMDLEDPTHLKLVRDYCDEEYVNEYWSIYQDLSKKVQIIIENLDPLSSQTQDIPGLADL IPDLRTGIGDGSFFSSQEGIPNTNNKEGFNPSIITDSNKSTITSIQKNSSSISTKRTASSQGTSGGTVGTVKTDKKVNPQ GGNPGSGAGDKQGNAKFDPKGKKESLTINEDIKIRLLRNSSTENRYLLRIIALQDIHGDINLGMVVNNEKKSCVPLPVES KISFNRKEIQWHENKIKDIKMQTNEFYDCEIVLPNSAEFAISTI >Mature_683_residues SIFNYSNPWNFPSLGYGKEKGLNNASDIFKHLDNVGLETAQNSRNSCMKDDNGEDVEVSVEYRLKNIESRFFPGIEDYKK RLESAIEYFQNKEASSGSNKPIGKEIIQLSRALRILNQDTIPVLTIRDYGTKGLKGGEDEDFAPYFRLIKSTGISAAQGT KAGRFGHGQNALVAKSDIKAYTLFSQFTNEYEEKETLFAGNSILCSHIDPTQNYKTQETGFIGNVINPNKFVSYRNNDLL NINFPYERSTNGTDIYIWGFKHESDNWDLLLAKGLIKGFFAAIREKLINFKIINDNTNEILHEINHENLDEYYSTLEVQV KKRLSSKAWNKEMQSIYGFLKTTCNEHSISITGKRSTHLIDVKKIGKVEMTLYQDKDDQKLTKEWCIMRQPLMKIRNFSK PIGIPFNAVVKVLSDKGNDVFMDLEDPTHLKLVRDYCDEEYVNEYWSIYQDLSKKVQIIIENLDPLSSQTQDIPGLADLI PDLRTGIGDGSFFSSQEGIPNTNNKEGFNPSIITDSNKSTITSIQKNSSSISTKRTASSQGTSGGTVGTVKTDKKVNPQG GNPGSGAGDKQGNAKFDPKGKKESLTINEDIKIRLLRNSSTENRYLLRIIALQDIHGDINLGMVVNNEKKSCVPLPVESK ISFNRKEIQWHENKIKDIKMQTNEFYDCEIVLPNSAEFAISTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77222; Mature: 77091
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS00283 SOYBEAN_KUNITZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFNYSNPWNFPSLGYGKEKGLNNASDIFKHLDNVGLETAQNSRNSCMKDDNGEDVEVS CCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCEEEE VEYRLKNIESRFFPGIEDYKKRLESAIEYFQNKEASSGSNKPIGKEIIQLSRALRILNQD EEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC TIPVLTIRDYGTKGLKGGEDEDFAPYFRLIKSTGISAAQGTKAGRFGHGQNALVAKSDIK CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEECCCH AYTLFSQFTNEYEEKETLFAGNSILCSHIDPTQNYKTQETGFIGNVINPNKFVSYRNNDL HHHHHHHHHHHHHHHHHEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCE LNINFPYERSTNGTDIYIWGFKHESDNWDLLLAKGLIKGFFAAIREKLINFKIINDNTNE EEEECCCCCCCCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCEEEEECCCHHH ILHEINHENLDEYYSTLEVQVKKRLSSKAWNKEMQSIYGFLKTTCNEHSISITGKRSTHL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEE IDVKKIGKVEMTLYQDKDDQKLTKEWCIMRQPLMKIRNFSKPIGIPFNAVVKVLSDKGND EEHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCE VFMDLEDPTHLKLVRDYCDEEYVNEYWSIYQDLSKKVQIIIENLDPLSSQTQDIPGLADL EEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH IPDLRTGIGDGSFFSSQEGIPNTNNKEGFNPSIITDSNKSTITSIQKNSSSISTKRTASS HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCHHHCCCC QGTSGGTVGTVKTDKKVNPQGGNPGSGAGDKQGNAKFDPKGKKESLTINEDIKIRLLRNS CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECC STENRYLLRIIALQDIHGDINLGMVVNNEKKSCVPLPVESKISFNRKEIQWHENKIKDIK CCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCHHHEEE MQTNEFYDCEIVLPNSAEFAISTI ECCCCEEEEEEEECCCCCEEEECC >Mature Secondary Structure SIFNYSNPWNFPSLGYGKEKGLNNASDIFKHLDNVGLETAQNSRNSCMKDDNGEDVEVS CCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCEEEE VEYRLKNIESRFFPGIEDYKKRLESAIEYFQNKEASSGSNKPIGKEIIQLSRALRILNQD EEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC TIPVLTIRDYGTKGLKGGEDEDFAPYFRLIKSTGISAAQGTKAGRFGHGQNALVAKSDIK CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEECCCH AYTLFSQFTNEYEEKETLFAGNSILCSHIDPTQNYKTQETGFIGNVINPNKFVSYRNNDL HHHHHHHHHHHHHHHHHEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCE LNINFPYERSTNGTDIYIWGFKHESDNWDLLLAKGLIKGFFAAIREKLINFKIINDNTNE EEEECCCCCCCCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCEEEEECCCHHH ILHEINHENLDEYYSTLEVQVKKRLSSKAWNKEMQSIYGFLKTTCNEHSISITGKRSTHL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEE IDVKKIGKVEMTLYQDKDDQKLTKEWCIMRQPLMKIRNFSKPIGIPFNAVVKVLSDKGND EEHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCE VFMDLEDPTHLKLVRDYCDEEYVNEYWSIYQDLSKKVQIIIENLDPLSSQTQDIPGLADL EEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH IPDLRTGIGDGSFFSSQEGIPNTNNKEGFNPSIITDSNKSTITSIQKNSSSISTKRTASS HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCHHHCCCC QGTSGGTVGTVKTDKKVNPQGGNPGSGAGDKQGNAKFDPKGKKESLTINEDIKIRLLRNS CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECC STENRYLLRIIALQDIHGDINLGMVVNNEKKSCVPLPVESKISFNRKEIQWHENKIKDIK CCCCEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCHHHEEE MQTNEFYDCEIVLPNSAEFAISTI ECCCCEEEEEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA