Click here to switch to the map view.

The map label for this gene is 123965671

Identifier: 123965671

GI number: 123965671

Start: 387408

End: 388190

Strand: Direct

Name: 123965671

Synonym: P9515_04361

Alternate gene names: NA

Gene position: 387408-388190 (Clockwise)

Preceding gene: 123965668

Following gene: 123965673

Centisome position: 22.73

GC content: 42.02

Gene sequence:

>783_bases
ATGAAAATCATTAAGAAACTCAGGTCGCTACCGAGCGATTCTCTGAGCGTTATTCGCCGCACCCCGCCACTTGTTTTCGC
AATGGCTGTACTTTCTCTCGGAGGATTTATAGGCGCCTCTACTGTCCTTGTGAAAGGGTTCAGAACAGTTGAGAATACTA
TCACTGTAACTGGTGCAAGCACAGAGAGTTTTGAGAGTGACATAGCAAAATGGTCAGTCCAGGTAAAGACCTCAGGTAAA
ACTCAGATTGACTCATTTACTAAACATAAACAGTCCATTAAAAAGACAATGGAATTCCTAAAAGCCAATGGAATTGAGGA
CAGCGTAAAGCAGGATGTTTATCTTGGGCCTGCAAGTATTAGTGAATATACAACCAAGCATCCGAAGACTAATGAAATCA
TTAGAACTGAATGGATTACTTATCAGAATATTGAGATTGAAAGTAGGGATGTTTATAACATCCAGAAGACTCATAGTCAG
ATAACAGAATTGCTTGGAAAAGGTGTGAGAGTTAAGCCAAGCCGTCCTGAATTTACTTATTCCAAGCTTGCTGATAAACG
CGTTGATATGCTTGCAAAGGCTGCAAAGGATGCGAGAGTCAGGGCTGAAGCTATCGCTCTTCAGGCGGGCTCTGAAGTGG
GTGGATTAAAGAGGGTTAATACTGGAGTTTTTCAGATAACAGTTCCTAATTCCACGAGGGTAAGCAGCTGGGGTTCTTAT
GATACTTCAACAATAAAGAAAGACATCACTGCCGTTATGGGAGTGACTTTCGCGGTTAAGTGA

Upstream 100 bases:

>100_bases
TAATGGCCAGATAGAACTGAAGGATTGGAGATCAGGTTTTTAAAAATATTTTTCTTTCGGTTCAGCTGTTAAAAAGTTCC
TACACAAATACTTCTAGACA

Downstream 100 bases:

>100_bases
TGACTTAGGGAGTCTTCTTTTTGCCTTTAAGAATCATCAGCAAAGGCAGACCAATAAGCATCAGACTCCCATCAATTAAT
AAAAAAGTATTTAGATTCAT

Product: periplasmic protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKIIKKLRSLPSDSLSVIRRTPPLVFAMAVLSLGGFIGASTVLVKGFRTVENTITVTGASTESFESDIAKWSVQVKTSGK
TQIDSFTKHKQSIKKTMEFLKANGIEDSVKQDVYLGPASISEYTTKHPKTNEIIRTEWITYQNIEIESRDVYNIQKTHSQ
ITELLGKGVRVKPSRPEFTYSKLADKRVDMLAKAAKDARVRAEAIALQAGSEVGGLKRVNTGVFQITVPNSTRVSSWGSY
DTSTIKKDITAVMGVTFAVK

Sequences:

>Translated_260_residues
MKIIKKLRSLPSDSLSVIRRTPPLVFAMAVLSLGGFIGASTVLVKGFRTVENTITVTGASTESFESDIAKWSVQVKTSGK
TQIDSFTKHKQSIKKTMEFLKANGIEDSVKQDVYLGPASISEYTTKHPKTNEIIRTEWITYQNIEIESRDVYNIQKTHSQ
ITELLGKGVRVKPSRPEFTYSKLADKRVDMLAKAAKDARVRAEAIALQAGSEVGGLKRVNTGVFQITVPNSTRVSSWGSY
DTSTIKKDITAVMGVTFAVK
>Mature_260_residues
MKIIKKLRSLPSDSLSVIRRTPPLVFAMAVLSLGGFIGASTVLVKGFRTVENTITVTGASTESFESDIAKWSVQVKTSGK
TQIDSFTKHKQSIKKTMEFLKANGIEDSVKQDVYLGPASISEYTTKHPKTNEIIRTEWITYQNIEIESRDVYNIQKTHSQ
ITELLGKGVRVKPSRPEFTYSKLADKRVDMLAKAAKDARVRAEAIALQAGSEVGGLKRVNTGVFQITVPNSTRVSSWGSY
DTSTIKKDITAVMGVTFAVK

Specific function: Unknown

COG id: COG2859

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28651; Mature: 28651

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIKKLRSLPSDSLSVIRRTPPLVFAMAVLSLGGFIGASTVLVKGFRTVENTITVTGAS
CHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
TESFESDIAKWSVQVKTSGKTQIDSFTKHKQSIKKTMEFLKANGIEDSVKQDVYLGPASI
HHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEECCCHH
SEYTTKHPKTNEIIRTEWITYQNIEIESRDVYNIQKTHSQITELLGKGVRVKPSRPEFTY
HHHHCCCCCCCCEEEEEEEEEECCEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCHH
SKLADKRVDMLAKAAKDARVRAEAIALQAGSEVGGLKRVNTGVFQITVPNSTRVSSWGSY
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCEEEEECCCCCCCCCCCCC
DTSTIKKDITAVMGVTFAVK
CHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MKIIKKLRSLPSDSLSVIRRTPPLVFAMAVLSLGGFIGASTVLVKGFRTVENTITVTGAS
CHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
TESFESDIAKWSVQVKTSGKTQIDSFTKHKQSIKKTMEFLKANGIEDSVKQDVYLGPASI
HHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEECCCHH
SEYTTKHPKTNEIIRTEWITYQNIEIESRDVYNIQKTHSQITELLGKGVRVKPSRPEFTY
HHHHCCCCCCCCEEEEEEEEEECCEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCHH
SKLADKRVDMLAKAAKDARVRAEAIALQAGSEVGGLKRVNTGVFQITVPNSTRVSSWGSY
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCEEEEECCCCCCCCCCCCC
DTSTIKKDITAVMGVTFAVK
CHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA